Factsheet for Zm00001d040805_P003

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d009248_P002	Maize	cytosol	93.1	93.31
OQU86843	Sorghum	cytosol	95.44	92.86
Os01t0360200-01	Rice	plasma membrane	88.32	87.73
TraesCS3D01G187300.2	Wheat	cytosol	85.32	85.22
TraesCS3A01G182900.1	Wheat	cytosol	85.32	85.13
TraesCS3B01G212900.5	Wheat	cytosol	85.21	85.11
HORVU4Hr1G086500.1	Barley	cytosol	79.98	85.09
TraesCS5A01G527600.1	Wheat	cytosol	79.53	84.42
TraesCS4B01G358800.1	Wheat	cytosol	79.31	84.18
TraesCS4D01G352200.3	Wheat	cytosol	79.2	84.06
HORVU3Hr1G037600.3	Barley	cytosol, peroxisome, plastid	40.16	78.65
CDY65632	Canola	nucleus, peroxisome	11.12	69.44
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	63.52	68.47
CDY22644	Canola	plasma membrane	43.6	68.06
KRH33894	Soybean	cytosol	61.07	66.55
Solyc01g099620.2.1	Tomato	cytosol	62.18	64.62
PGSC0003DMT400063688	Potato	cytosol	61.74	64.01
KRG92895	Soybean	extracellular, mitochondrion	62.96	63.67
KRH68525	Soybean	cytosol	61.96	62.94
VIT_14s0060g02320.t01	Wine grape	cytosol	62.07	62.42
KRG96816	Soybean	cytosol	61.51	62.34
AT1G09090.2	Thale cress	cytosol	57.17	60.97
Zm00001d023859_P001	Maize	plastid	60.85	60.64
Bra031658.1-P	Field mustard	cytosol	57.06	60.64
CDY06348	Canola	cytosol	54.06	59.56
Zm00001d052653_P003	Maize	cytosol, plastid	59.51	55.1
Zm00001d007430_P002	Maize	cytosol	48.05	52.55
Zm00001d007421_P004	Maize	cytosol	55.17	52.32
Zm00001d009349_P004	Maize	plastid	46.16	50.49
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	46.72	49.88
Zm00001d038762_P001	Maize	plastid	52.5	49.79
Zm00001d043543_P002	Maize	mitochondrion	52.17	49.73
Zm00001d007426_P001	Maize	cytosol, plastid	52.73	47.64
Zm00001d042961_P002	Maize	plasma membrane	45.94	46.77
Zm00001d032079_P001	Maize	mitochondrion	48.83	44.98
Zm00001d029861_P002	Maize	plastid	32.15	38.28
Zm00001d020609_P001	Maize	mitochondrion	27.81	35.26
Zm00001d003559_P001	Maize	plasma membrane	13.01	15.39

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	EntrezGene:100384248	Gene3D:2.40.30.10	Gene3D:3.40.50.80	UniProt:A0A1D6MT19
ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016174	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	ProteinID:ONM32069.1	PFAM:PF01794
PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222
PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF57	InterPro:RBOHB	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI000842D3E4	EnsemblPlantsGene:Zm00001d040805
EnsemblPlants:Zm00001d040805_P003	EnsemblPlants:Zm00001d040805_T003	SEG:seg	:	:	:

Description

Respiratory burst oxidase homolog protein B

Coordinates

chr3:-:67066176..67071878

Molecular Weight (calculated)

101553.0 Da

IEP (calculated)

9.852

GRAVY (calculated)

-0.256

Length

899 amino acids

Sequence
(BLAST)

001: MADTVTGSSR RSQDDTATLI PHSGNLGGSS RKGVKAARFK DDDEVVEITI VQRDSMAIED VRVVDDGGSG HGGGFDGLSL VSPSSSRSGK LASKFRQVKN
101: GLKMNNSSNK APQTQLGKNV RKRLDRSKSG AAVALKGLQF VTAKVGHDGW AAVEKRFNQL QVDGVLLRSR FGKCIGMDGS DEFAMQVFDS LARKRGITKQ
201: VLTKDELKDF WDQLSDQGFD NRLRTFFDMV DKNADGRITA EEVKEIISLS ASANKLSKLK ERADEYTALI MEELDRDNLG YIELEDLEAL LLQSPSQAAA
301: RSTTHSSKLS KALSMKLASN KGTGPFYHYW QEFMYFLEEN WKRIWVMTLW LSICICLFIW KFIQYRNRAV FHIMGYCVTT AKGAAETLKF NMALVLFPVC
401: RNTITWIRSK TKIGAVVPFN DNINFHKVRH MYSVIAAGVA VGVALHAGAH LTCDFPRLLH ASDAAYEPMK PFFGDKRPPN YWWFVKGTEG WTGVVMVVLM
501: TIAFVLAQPW FRRNRLKDSN PLKKMTGFNA FWFTHHLFVI VYALLVVHGI CLYLSRKWYK KTTWMYLAVP VLLYVSERIL RLFRSHDAVR IQKVAVYPGN
601: VLALYMSKPP GFRYRSGQYI FINCRAVSPY EWHPFSITSA PGDDYLSVHI RTRGDWTSRL RTIFSEPCRP PTDGESGLLR ADLSKGITES SARFPKLLID
701: GPYGAPAQDY REYDVLLLIG LGIGATPLIS IVKDVLNHTQ HGGSVSGTEP EGSGKAKKRP FMTKRAYFYW VTREEGSFEW FRGVMNEVAE KDKDGVIELH
801: NHCSSVYEEG DARSALIVML QELQHAKKGV DILSGTSVKT HFARPNWRSV FKHVAVNHEN QRVGVFYCGE PVLVPQLRQW SADFTHKTNT KFEFHKENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.