Factsheet for Solyc06g075570.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	98.19	97.72
Solyc11g072800.1.1	Tomato	cytosol	73.49	74.75
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	25.54	71.86
VIT_06s0004g03790.t01	Wine grape	nucleus	70.12	68.31
GSMUA_Achr5P29250_001	Banana	cytosol	57.11	65.65
CDX86059	Canola	peroxisome, plasma membrane, plastid	30.24	64.19
GSMUA_AchrUn_...	Banana	cytosol	17.47	63.6
GSMUA_AchrUn_...	Banana	cytosol	33.49	63.47
KRH49079	Soybean	cytosol	65.3	63.1
Os01t0835500-01	Rice	cytosol	63.37	62.4
Os05t0465800-01	Rice	plasma membrane	61.33	62.15
Zm00001d009349_P004	Maize	plastid	61.2	61.8
TraesCS1D01G289300.2	Wheat	mitochondrion	59.4	61.62
GSMUA_Achr10P...	Banana	cytosol	62.41	61.37
TraesCS1A01G290700.2	Wheat	mitochondrion	59.04	61.25
OQU87817	Sorghum	cytosol	62.77	61.01
TraesCS3D01G347900.2	Wheat	cytosol	61.93	60.68
KXG32613	Sorghum	cytosol, plastid	60.36	60.58
GSMUA_Achr11P...	Banana	mitochondrion	38.19	60.5
TraesCS3B01G386600.1	Wheat	cytosol	61.93	60.47
TraesCS3A01G354200.2	Wheat	cytosol	61.69	60.16
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	60.84	59.98
HORVU3Hr1G087210.4	Barley	peroxisome, plastid	62.05	59.47
Zm00001d042961_P002	Maize	plasma membrane	62.29	58.55
AT5G60010.1	Thale cress	cytosol	62.41	58.47
Bra020270.1-P	Field mustard	cytosol	62.05	58.26
CDY09233	Canola	cytosol	62.05	58.26
Bra038274.1-P	Field mustard	cytosol	58.92	55.95
TraesCS1B01G300000.2	Wheat	mitochondrion	59.64	55.62
AT3G45810.1	Thale cress	cytosol	60.12	54.71
CDX99140	Canola	cytosol, peroxisome, plasma membrane	52.05	51.18
Solyc05g025680.1.1	Tomato	plasma membrane	37.95	50.48
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	59.88	49.16
Solyc01g099620.2.1	Tomato	cytosol	49.4	47.4
Solyc06g068680.2.1	Tomato	cytosol	47.59	46.09
Solyc07g042460.1.1	Tomato	cytosol	48.55	45.74
Solyc08g081690.2.1	Tomato	cytosol	52.53	45.28
Solyc03g117980.2.1	Tomato	nucleus	48.8	43.18
Solyc05g025690.1.1	Tomato	mitochondrion	8.8	30.17
Solyc03g112320.2.1	Tomato	plasma membrane	11.69	17.48
Solyc01g094900.1.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	4.1	17.44
Solyc01g094890.2.1	Tomato	plasma membrane	14.94	17.39
Solyc01g102610.2.1	Tomato	plastid	15.06	16.89
Solyc01g094910.2.1	Tomato	peroxisome, plasma membrane, plastid	13.86	15.99
Solyc06g036220.1.1	Tomato	plasma membrane	7.59	15.0

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927	UniProt:K4C9S2
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466
ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF54	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	EnsemblPlantsGene:Solyc06g075570.1	EnsemblPlants:Solyc06g075570.1.1	TMHMM:TMhelix
UniParc:UPI0002766D3D	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr6:-:46948837..46953140

Molecular Weight (calculated)

95397.9 Da

IEP (calculated)

9.348

GRAVY (calculated)

-0.267

Length

830 amino acids

Sequence
(BLAST)

001: MVPIDDGDLS RDNSVKWILE NAEKDSTSDI HENRNGANGL QELANQKSFK KNFSISRRRN GVVPRMGRME SGATRGLKSL RFLDRSTTGK EGDAWRSVEK
101: RFNQNAVNGR IFREKFGTCI GMGESKEFAG ELFDTLARRR KINTENGITI DEVKGFWEDI STQSLDARLH IFFDMCDKNG DGKLSEEEVK EVLVMSASAN
201: KLSKFKQHAP TYAALIMEEL DPDHLGYIEM WQLEALLRGM VGSEEGEKTL KRSQTLAKTM IPKEYRTPVS KFFYKTSEKI QENWKRIWVL TLWLCINMIL
301: FTWKFQQFKR KSAFQIMGYC VCIAKGAGET LKFNMALVLF PVCRRTLTKL RETFLGSIFP FDDNINFHKI IALGIAVATF IHALFHTSCN FVKLTTCPQS
401: KFMTFLGSNF DYHQPSYLDL VASIPGVTGI LMTLFMLFSF TLATHSFRRN VIKLPWPFHH LAGFNAFWYA HHLLVLVYIL LVLHGYFIYL TKEWYKKTTW
501: MYLAVPVLAY ATERTLIVYE HSYNVNIIKA VTYTGNVLAL YMSKPPGFKY KSGMYLFVKC PDISTFEWHP FSITSAPDDN YLSVHIRTLG DWTTELKTRF
601: EKACEPDQVA QSRKGSLVRM ETKAYSDVEQ AQSEFPKIMI KGPYGAPAQN YKKYDILLLI GLGIGATPFI SILKDLLNNE SQSNGELSSN RRGPDRAYFY
701: WVTREQGSFD WFKGVMDDIA EYDHNEMMEM HNYLTSVYEE GDARSALIAM VQSLQHAKNG VDVVSDSRIR THFARPNWRK VFSRLAAAHP SSRIGVFYCG
801: SPTLTKPLRR LCQEFSLNSS TRFNFHKENF

Best Arabidopsis Sequence Match ( AT5G60010.1 )
(BLAST)

001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF

Arabidopsis Description

RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.