CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042961_P002	Maize	plasma membrane	96.49	93.32
Os01t0835500-01	Rice	cytosol	89.23	90.39
TraesCS3B01G386600.1	Wheat	cytosol	87.82	88.24
TraesCS3D01G347900.2	Wheat	cytosol	87.35	88.08
TraesCS3A01G354200.2	Wheat	cytosol	87.35	87.66
HORVU3Hr1G087210.4	Barley	peroxisome, plastid	87.12	85.91
KXG32613	Sorghum	cytosol, plastid	76.23	78.72
GSMUA_AchrUn_...	Banana	cytosol	20.02	75.0
GSMUA_AchrUn_...	Banana	cytosol	36.07	70.32
Solyc06g075570.1.1	Tomato	cytosol	61.01	62.77
PGSC0003DMT400040179	Potato	cytosol	56.67	62.37
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	60.42	61.87
VIT_06s0004g03790.t01	Wine grape	nucleus	61.71	61.85
Solyc11g072800.1.1	Tomato	cytosol	57.14	59.8
KRH49079	Soybean	cytosol	59.95	59.6
CDX86059	Canola	peroxisome, plasma membrane, plastid	27.28	59.59
AT5G60010.1	Thale cress	cytosol	56.67	54.63
CDY09233	Canola	cytosol	56.09	54.19
Bra020270.1-P	Field mustard	cytosol	56.09	54.19
Bra038274.1-P	Field mustard	cytosol	55.04	53.78
AT3G45810.1	Thale cress	cytosol	56.67	53.07
CDX99140	Canola	cytosol, peroxisome, plasma membrane	47.19	47.75
EES01429	Sorghum	mitochondrion	51.52	46.61
KXG22389	Sorghum	mitochondrion	51.64	46.08
OQU86843	Sorghum	cytosol	48.95	45.24
EES16102	Sorghum	plastid	47.07	43.89
KXG35704	Sorghum	mitochondrion	49.65	42.11
KXG25273	Sorghum	mitochondrion	49.53	41.96
OQU83587	Sorghum	plastid	50.35	39.85
OQU92169	Sorghum	peroxisome, plastid	37.24	37.99
EES10867	Sorghum	plasma membrane	14.75	16.45

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	UniProt:A0A1W0W0C2	InterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927
InterPro:NADPH_Ox	EnsemblPlants:OQU87817	ProteinID:OQU87817	ProteinID:OQU87817.1	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF68	InterPro:Riboflavin_synthase-like_b-brl	EnsemblPlantsGene:SORBI_3003G347520	SUPFAM:SSF47473	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0009DC88DA	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:+:66803346..66808632

Molecular Weight (calculated)

96552.1 Da

IEP (calculated)

9.799

GRAVY (calculated)

-0.190

Length

854 amino acids

Sequence
(BLAST)

001: MAGYGDRRSP PLEGITVVDG GGSRAQSPVP VPGAGAGRLP PPPGGFARGL MKQPSRLASG VRQFASRVSM KVPEGVAGMR PGRMTRMQSS AQMGLRGLRF
101: LDKTSGGKEG WKAVERRFDD MTKGSGRLQK ESFGKCIGMG DSKEFAGELF VALARRRNLE PEDGITKEQL KEFWEEMTDQ NFDSRLRIFF DMCDKNGDGM
201: LTEDEVKEVI ILSASANKLA KLKGHAATYA SLIMEELDPD DRGYIEIWQL ETLLRGMVSA QAPEKLKRTP SSLARTMIPS RYRNPLKRHL SKTVDFIHEN
301: WKRIWLVTLW LVVNLALFVY KFEQYKRRTA FQVMGYCVCV AKGAAEILKL NMALILLPVC RNTLTTLRST ALSHVIPFDD NINFHKIMAL SIAIATAIHT
401: LAHVTCDFPR LISCPTDKFM ATLGSNFHYK QPTYPDLLES IPGVTGILMI IIMSFSFTLA THSFRRSVVK LPSPLHHLAG FNAFWYAHHL LVIAYILLVV
501: HSYFIFLTRE WYKKTTWMYL IVPVLFYACE RIIRKFRENN YHAEIVRAAI YPGNVLSIHM KKPQGFKYKS GMYLFVKCPE VSPFEWHPFS ITSAPGDDYL
601: SVHIRTLGDW TSELRMLFGK ACEAQVTSKK ATLTRLETTV VADARTEDTR FPKVYIDGPY GAPAQNYRKY DILLLIGLGI GATPFISILK DMLNNLKSTE
701: EVESIHGSEI GSFKNNGPGR AYFYWVTREQ GSFEWFKGVM NEVAESDHSN VIEMHNYLTS VYEEGDARSA LIAMVQSLQH AKNGVDIVSG SKIRTHFARP
801: NWRKVFSDLA NAHRNSRIGV FYCGSPTLTK QLKDLSKEFS QTTTTRFHFH KENF

Best Arabidopsis Sequence Match ( AT5G60010.1 )
(BLAST)

001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF

Arabidopsis Description

RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.