CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052653_P003	Maize	cytosol, plastid	79.05	87.85
TraesCS4D01G324800.1	Wheat	cytosol	71.27	83.77
TraesCS5A01G499900.1	Wheat	cytosol	71.18	83.57
TraesCS4B01G327800.2	Wheat	cytosol	70.81	83.32
GSMUA_Achr6P11760_001	Banana	golgi	31.05	82.11
Os11t0537400-01	Rice	plasma membrane	3.34	81.82
HORVU4Hr1G081670.1	Barley	cytosol	73.31	80.96
TraesCS5B01G299000.1	Wheat	cytosol	68.58	80.61
TraesCS5D01G306400.1	Wheat	cytosol	68.4	80.48
TraesCS5A01G301700.1	Wheat	cytosol	68.58	80.43
GSMUA_Achr6P16270_001	Banana	cytosol	59.13	74.1
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	56.72	73.38
GSMUA_Achr10P...	Banana	cytosol	62.47	73.34
GSMUA_Achr6P11770_001	Banana	cytosol	27.06	72.64
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	57.92	67.64
TraesCS1B01G295100.1	Wheat	plasma membrane	42.45	67.06
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	58.02	66.74
Solyc03g117980.2.1	Tomato	nucleus	57.83	66.52
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	56.07	65.69
Bra037520.1-P	Field mustard	cytosol	55.79	65.29
HORVU1Hr1G072160.5	Barley	cytosol	56.35	65.03
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	55.33	64.82
TraesCS1A01G285700.1	Wheat	cytosol	55.98	64.67
Solyc06g068680.2.1	Tomato	cytosol	50.32	63.36
AT5G51060.1	Thale cress	cytosol	53.1	63.31
Bra029194.1-P	Field mustard	cytosol	53.2	63.08
KRH63901	Soybean	cytosol, nucleus, plasma membrane	54.22	63.04
VIT_01s0150g00450.t01	Wine grape	cytosol	53.75	62.84
VIT_19s0014g02830.t01	Wine grape	cytosol	48.38	62.14
KRH54051	Soybean	cytosol, nucleus, plasma membrane	54.03	61.96
TraesCS1D01G284800.1	Wheat	plastid	57.18	61.76
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	26.32	61.61
KRH41026	Soybean	mitochondrion	50.51	61.37
HORVU1Hr1G072140.1	Barley	cytosol	52.73	61.25
TraesCS1B01G295300.1	Wheat	cytosol	48.1	60.92
KRH59706	Soybean	cytosol	50.51	60.69
TraesCS1A01G357100.1	Wheat	cytosol	36.33	60.22
AT5G07390.1	Thale cress	cytosol	49.86	59.65
AT4G25090.1	Thale cress	cytosol	46.9	59.6
EES16102	Sorghum	plastid	50.23	59.17
OQU86843	Sorghum	cytosol	50.51	58.98
Bra009266.1-P	Field mustard	cytosol	49.03	58.65
HORVU5Hr1G078630.1	Barley	cytosol	52.36	58.55
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	44.67	57.86
TraesCS1D01G285000.1	Wheat	cytosol	46.8	55.62
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	42.35	54.86
EES01429	Sorghum	mitochondrion	46.99	53.71
KXG22389	Sorghum	mitochondrion	46.62	52.56
HORVU0Hr1G013380.4	Barley	plastid	37.44	51.4
KXG32613	Sorghum	cytosol, plastid	39.2	51.15
OQU87817	Sorghum	cytosol	39.85	50.35
TraesCS1D01G284900.1	Wheat	cytosol	53.85	50.09
Bra011911.1-P	Field mustard	cytosol	29.66	49.69
KXG35704	Sorghum	mitochondrion	44.21	47.37
TraesCS1B01G295200.1	Wheat	cytosol	53.01	46.77
KXG25273	Sorghum	mitochondrion	43.47	46.53
OQU92169	Sorghum	peroxisome, plastid	31.14	40.14
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	7.88	39.91
Bra013862.1-P	Field mustard	cytosol	9.36	39.0
CDY22645	Canola	cytosol	8.16	38.94
EES10867	Sorghum	plasma membrane	12.14	17.1

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	UniProt:A0A1Z5RIU6	InterPro:Cyt_b245_heavy_chain
InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509
GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	InterPro:IPR017927
InterPro:NADPH_Ox	EnsemblPlants:OQU83587	ProteinID:OQU83587	ProteinID:OQU83587.1	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054	EnsemblPlantsGene:SORBI_3005G139700	SUPFAM:SSF47473
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI000B426C7A	SEG:seg	:

Description

hypothetical protein

Coordinates

chr5:-:59440994..59448226

Molecular Weight (calculated)

120576.0 Da

IEP (calculated)

9.943

GRAVY (calculated)

-0.348

Length

1079 amino acids

Sequence
(BLAST)

0001: MQQQQQCSPR QPPLDPAIFL PHTKQHSTTT PAPSRPVPSP PHCSAAGGVG DERRRLVKNV RASRAGPSSR YGYKTSPPFL AQRSTVHPSP PVPVSSLPPS
0101: LASDYRNPPP PPYQPLAFRF FASLVKQLTT EKEERPAGRS KIAMHNPRPG GGDIVEMSSS SSAAAPHEAG ARDRERVIPH SGPLSKKTGA RKSARFAESV
0201: SAPLTAPPPP RASSANNNDD DDDYVEITLD VRDDSVAVHS VKPAHGGGGG GDDSDVTLLA RTLENRRASG HSVIRNASSR IKQVSQELRR IASINRRGGG
0301: GGARLDRSKS AAAHALKGLK FISKAEGAAG WEAVEKRFDK LAENGLLHRS KFGQCIGMKE PEFAGELFDA LSRRRNISGD SISKAELLEF WDQISDTSFD
0401: GRLQTFFDMV DKDADGRITE EEVKEIITLS ASANKLSKIT DQAEEYARLI MEELDPANLG YIELYNLEML LLQAPSQSVR IGTTNSRNLS QMLSQSLRPT
0501: PEPNPLRRWY RRVHYFLEDN WRRVWVLLLW LSICAALFAW KFTQYRRRYV FHVMGYCVCV AKGGAETLKF NMALILLPVC RNTITWLRNR TTAVARVVPF
0601: DDSLNFHKVV AVGITVGAAL HIVSHLTCDF PRLLHATDEA YAPLGQYFGT RRPPDYWWFV KGTEGWTGLV MLVLMAVAFT LATPWFRRGR VALPGPVLRR
0701: LTGFNAFWYS HHCFVAVYAL LVVHGQYLYL THKWYKKSTW MYLAVPVALY ACERLTRALR SSVRPVKILK VAVYPGNVLS LHFSKPQGFR YRSGQYIFVN
0801: CAAVSPFQWH PFSITSAPQD DYVSVHIRTL GDWTRELKNV FSRVCRPPTE GKSGLLRAEY DRDGSAMANP SFPKVLIDGP YGAPAQDYKQ YDIVLLVGLG
0901: IGATPMISII KDIINNMKQP DGDLEAGAGA DTSASSMASS FRTRRAYFYW VTREQGSFEW FRGVMDEVAE TDKKGVIELH NYCTSVYEEG DARSALIAML
1001: QSLNHAKHGV DVVSGTRVKT HFARPNWRNV YKRIALNHQN QRVGVFYCGA PVLTKELREL AQDFSRKTNT KFEFHKENF

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.