Factsheet for TraesCS1B01G295200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G284900.1	Wheat	cytosol	83.48	88.02
HORVU1Hr1G072140.1	Barley	cytosol	60.18	79.22
TraesCS1B01G295300.1	Wheat	cytosol	51.92	74.53
TraesCS1B01G295100.1	Wheat	plasma membrane	38.84	69.55
TraesCS4B01G327800.2	Wheat	cytosol	48.41	64.56
TraesCS5B01G299000.1	Wheat	cytosol	48.08	64.05
GSMUA_Achr6P11760_001	Banana	golgi	20.93	62.75
Os11t0537400-01	Rice	plasma membrane	2.21	61.36
Zm00001d052653_P003	Maize	cytosol, plastid	47.42	59.73
GSMUA_Achr6P16270_001	Banana	cytosol	41.29	58.65
GSMUA_Achr10P...	Banana	cytosol	43.42	57.78
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	38.84	56.95
GSMUA_Achr6P11770_001	Banana	cytosol	18.64	56.72
Zm00001d007430_P002	Maize	cytosol	38.02	56.57
Zm00001d007421_P004	Maize	cytosol	43.25	55.8
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	40.15	53.14
KRH63901	Soybean	cytosol, nucleus, plasma membrane	40.23	53.02
OQU83587	Sorghum	plastid	46.77	53.01
VIT_19s0014g02830.t01	Wine grape	cytosol	36.06	52.5
Zm00001d007426_P001	Maize	cytosol, plastid	42.6	52.36
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	39.25	52.12
Bra037520.1-P	Field mustard	cytosol	39.25	52.06
Solyc06g068680.2.1	Tomato	cytosol	36.3	51.81
KRH54051	Soybean	cytosol, nucleus, plasma membrane	39.82	51.75
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	38.59	51.25
TraesCS4B01G358800.1	Wheat	cytosol	35.49	51.24
Solyc03g117980.2.1	Tomato	nucleus	39.25	51.17
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	39.25	51.17
VIT_01s0150g00450.t01	Wine grape	cytosol	38.35	50.81
KRH41026	Soybean	mitochondrion	36.79	50.68
TraesCS5B01G099700.1	Wheat	cytosol	36.14	50.63
AT5G51060.1	Thale cress	cytosol	37.45	50.61
KRH59706	Soybean	cytosol	36.71	50.0
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	33.69	49.46
Bra029194.1-P	Field mustard	cytosol	36.79	49.45
TraesCS3B01G212900.5	Wheat	cytosol	36.3	49.33
AT4G25090.1	Thale cress	cytosol	33.77	48.65
AT5G07390.1	Thale cress	cytosol	35.57	48.23
Bra009266.1-P	Field mustard	cytosol	35.49	48.12
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	32.54	47.78
TraesCS3B01G386600.1	Wheat	cytosol	30.66	44.12
TraesCS1B01G362200.1	Wheat	mitochondrion	34.91	43.93
TraesCS3B01G314000.2	Wheat	mitochondrion	33.69	43.64
TraesCS1B01G300000.2	Wheat	mitochondrion	30.34	41.69
TraesCS6B01G205000.1	Wheat	mitochondrion	32.05	40.96
TraesCS5B01G212100.1	Wheat	mitochondrion	32.95	40.91
Bra011911.1-P	Field mustard	cytosol	21.26	40.37
TraesCS1B01G293900.1	Wheat	cytosol, peroxisome, plasma membrane	23.96	36.22
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	5.81	33.33
Bra013862.1-P	Field mustard	cytosol	6.21	29.34
CDY22645	Canola	cytosol	5.15	27.88
TraesCS2B01G414300.1	Wheat	plasma membrane	10.3	17.43
TraesCS2B01G329600.1	Wheat	plasma membrane	10.06	16.47

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	ncoils:Coil	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR017927
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	ScanProsite:PS00018
PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054
SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G295200	EnsemblPlants:TraesCS1B01G295200.1
TIGR:cd00051	TIGR:cd06186	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr1B:+:513155703..513165210

Molecular Weight (calculated)

139429.0 Da

IEP (calculated)

9.029

GRAVY (calculated)

-0.398

Length

1223 amino acids

Sequence
(BLAST)

0001: MPSRVGADDA RGGPGVGEIV DASGGVRERA VPPGNRSAAR KTARFAEPVS APRGSGNVDD DDGDGDDGDG VEITFDKRYD TIAVPRVRPV ARGEDPCVKL
0101: LARTPEKPES SSGHAVLKNS LTRIQQETRR VASLKRRGGG FDRPMPSAPA RALQGLKFVS ETHASNGWTE AERFYDRNVR LPRSMFGQCI GMKEAAFAGE
0201: LFDTLGRRRR ISGDSIDRAE LREFWDQISD PSYENRLQLF FDMVDKDADG RISQVEFKQI ITMSASANQL TVGGQDFEEC ARLIMEKLDP DGLGYIELYD
0301: LETLLVKLWK EPNPLRRWYR HARYFLKDNW RPCWVASLNR RGGGFDRSMP SAPARALEGL KFVSGTDASD GWTEARRFFD RNARLPRSMF GQCIGMKEAA
0401: FAGELFDALG RRCHISGDSI DKAELREFWD QISDSCYETR LQLFFGMVDK DDDGRISQII TLSASANKLK VGEQDSEECA RLIMEKLDPD GLGHIELYDL
0501: KTLLVELSTT TNGDESSNPM AEPNPLRRWY HHARYFLEDN WRRCWVMLLW FSICAGLFAW KFVQYRHRAV FQVMGYCVCV AKGGAETLKF NMALTLLPVC
0601: RNAITWLRSR TVAGQFVPFN DNLNFHKVIA VGISAGAGLH VFSHLACDFP RLLHATDDEY KPMKPFFGDV KPPNYWWFLK GTEGWTGLVM LVLMAIAFTL
0701: ATGRFRNRKP RLAKPKKQDD NLPRHKKRDN LPRLLHRLTE YGGASRNRLT MLFYALLNRF TGYNTFLYTH HLFIIVYVLL IVHGHFLYLT KKWQKKTRGP
0801: EGIERILTCM GFNLSWISFK PMMWYVQTWM YLAVPMIVYA CERLTRTLRS RVRAVQKVKA VVHPDPAALL SLHLSKPQGF RYKSGQYIFV KCPDISSFEW
0901: HPFSITSAPE DDYVSVHIKA MGDWTKDLKD AFKVCESSTE EKKTEILRVE YDHDKAMPTL GDRKNLLPGP TRSRFSFARM AGRISTYQLA FVTAMSPPLC
1001: MRYSIVYIFG KMDDHQLRYP KVLIDGPYGA PAQDYKQYDT LLLVGLGIGA TPMISIIKDI INNMKRLPGD IESGNPGDGS TPSSFRTRRA YFYWITREQE
1101: SLEWFRGIMD EVAETDEQGV IELHVHCTSV HEEGDARSAM LTMAQSLNHD EHGIDIISGS RVKTSFGRAN WREVYRHIAQ RNQRKRVGVF YCGMPALTKE
1201: LRELAKLSSR ETSTTFEFHK ENF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.