Factsheet for VIT_03s0063g00950.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

plastid 3
extracellular 3
nucleus 2
mitochondrion 1
endoplasmic reticulum 1
vacuole 2
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, nucleus, plastid, secretory
BaCelLo:	plastid
EpiLoc:	extracellular
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	nucleus, plastid
Predotar:	secretory
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P11760_001	Banana	golgi	20.19	10.54
VIT_02s0025g00510.t01	Wine grape	cytosol	43.66	9.86
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	38.5	9.83
GSMUA_Achr10P...	Banana	plasma membrane	23.94	9.79
GSMUA_Achr6P16270_001	Banana	cytosol	38.03	9.41
GSMUA_Achr10P...	Banana	nucleus, plastid	12.21	9.32
VIT_14s0060g02320.t01	Wine grape	cytosol	38.03	9.06
Zm00001d007430_P002	Maize	cytosol	34.74	9.0
VIT_19s0014g02830.t01	Wine grape	cytosol	35.21	8.93
Solyc06g068680.2.1	Tomato	cytosol	35.68	8.87
GSMUA_Achr10P...	Banana	cytosol	38.03	8.81
Zm00001d052653_P003	Maize	cytosol, plastid	39.91	8.75
TraesCS5D01G306400.1	Wheat	cytosol	37.56	8.72
TraesCS5B01G299000.1	Wheat	cytosol	37.56	8.71
TraesCS4D01G324800.1	Wheat	cytosol	37.56	8.71
TraesCS5A01G499900.1	Wheat	cytosol	37.56	8.71
TraesCS4B01G327800.2	Wheat	cytosol	37.09	8.62
TraesCS5A01G301700.1	Wheat	cytosol	37.09	8.59
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	36.62	8.44
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	35.68	8.29
TraesCS1B01G295300.1	Wheat	cytosol	32.86	8.22
Solyc03g117980.2.1	Tomato	nucleus	36.15	8.21
GSMUA_Achr6P11770_001	Banana	cytosol	15.49	8.21
HORVU4Hr1G081670.1	Barley	cytosol	37.56	8.19
VIT_01s0150g00450.t01	Wine grape	cytosol	35.21	8.13
HORVU5Hr1G078630.1	Barley	cytosol	36.62	8.08
Zm00001d007421_P004	Maize	cytosol	35.68	8.02
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	35.21	8.0
TraesCS1B01G295100.1	Wheat	plasma membrane	25.35	7.91
OQU83587	Sorghum	plastid	39.91	7.88
TraesCS1D01G285000.1	Wheat	cytosol	33.33	7.82
TraesCS1A01G285700.1	Wheat	cytosol	34.27	7.82
HORVU1Hr1G072160.5	Barley	cytosol	33.8	7.7
VIT_06s0004g03790.t01	Wine grape	nucleus	30.05	7.51
HORVU1Hr1G072140.1	Barley	cytosol	32.39	7.43
Zm00001d007426_P001	Maize	cytosol, plastid	34.27	7.34
TraesCS1D01G284800.1	Wheat	plastid	34.27	7.31
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	15.49	7.16
TraesCS1A01G357100.1	Wheat	cytosol	21.13	6.91
CDY70539	Canola	nucleus	9.86	6.86
HORVU0Hr1G013380.4	Barley	plastid	24.41	6.62
TraesCS1D01G284900.1	Wheat	cytosol	33.8	6.21
Bra013862.1-P	Field mustard	cytosol	7.51	6.18
CDY34341	Canola	nucleus	7.51	6.18
VIT_15s0046g01900.t01	Wine grape	plasma membrane	19.25	5.92
VIT_16s0050g00980.t01	Wine grape	plasma membrane	19.72	5.88
TraesCS1B01G295200.1	Wheat	cytosol	33.33	5.81
VIT_15s0046g01920.t01	Wine grape	plasma membrane	19.72	5.6
VIT_17s0000g09160.t01	Wine grape	plasma membrane	16.9	5.12
VIT_12s0035g02150.t01	Wine grape	plasma membrane	17.37	5.03
Os11t0537400-01	Rice	plasma membrane	0.94	4.55
VIT_16s0050g00990.t01	Wine grape	plastid	20.66	3.74

Protein Annotations

ArrayExpress:VIT_03s0063g00950	EMBL:FN596006	EnsemblPlants:VIT_03s0063g00950.t01	EnsemblPlantsGene:VIT_03s0063g00950	PANTHER:PTHR11972	PANTHER:PTHR11972:SF66
ProteinID:CCB56903	ProteinID:CCB56903.1	SEG:seg	UniParc:UPI0002108B4D	UniProt:F6HQE6	MapMan:35.1

Description

No Description!

Coordinates

chr3:+:4405632..4406487

Molecular Weight (calculated)

24817.1 Da

IEP (calculated)

11.037

GRAVY (calculated)

-0.572

Length

213 amino acids

Sequence
(BLAST)

001: MPTFPYPYLY SLLIPTKTLL SLTIEPRYST KPSQIPFGSI YTTYLSHSTG RSRSQSPNKG QAYDGDRSKS RNRSHSLEIY NKAPPVREWS LVHSSYKSAM
101: EQKLQSSPPL QRPNAVSPRR SWRRRPRNHC NLPYLPLHRQ ASRLIHGTHL YLVHKWYLKT TWTYLAVPVC LYARERTLRL SRSGFYVVRL LKVAMYPGNV
201: LVLQMSKPPQ FPL

Best Arabidopsis Sequence Match ( AT1G64060.1 )
(BLAST)

001: MKPFSKNDRR RWSFDSVSAG KTAVGSASTS PGTEYSINGD QEFVEVTIDL QDDDTIVLRS VEPATAINVI GDISDDNTGI MTPVSISRSP TMKRTSSNRF
101: RQFSQELKAE AVAKAKQLSQ ELKRFSWSRS FSGNLTTTST AANQSGGAGG GLVNSALEAR ALRKQRAQLD RTRSSAQRAL RGLRFISNKQ KNVDGWNDVQ
201: SNFEKFEKNG YIYRSDFAQC IGMKDSKEFA LELFDALSRR RRLKVEKINH DELYEYWSQI NDESFDSRLQ IFFDIVDKNE DGRITEEEVK EIIMLSASAN
301: KLSRLKEQAE EYAALIMEEL DPERLGYIEL WQLETLLLQK DTYLNYSQAL SYTSQALSQN LQGLRGKSRI HRMSSDFVYI MQENWKRIWV LSLWIMIMIG
401: LFLWKFFQYK QKDAFHVMGY CLLTAKGAAE TLKFNMALIL FPVCRNTITW LRSTRLSYFV PFDDNINFHK TIAGAIVVAV ILHIGDHLAC DFPRIVRATE
501: YDYNRYLFHY FQTKQPTYFD LVKGPEGITG ILMVILMIIS FTLATRWFRR NLVKLPKPFD RLTGFNAFWY SHHLFVIVYI LLILHGIFLY FAKPWYVRTT
601: WMYLAVPVLL YGGERTLRYF RSGSYSVRLL KVAIYPGNVL TLQMSKPTQF RYKSGQYMFV QCPAVSPFEW HPFSITSAPE DDYISIHIRQ LGDWTQELKR
701: VFSEVCEPPV GGKSGLLRAD ETTKKSLPKL LIDGPYGAPA QDYRKYDVLL LVGLGIGATP FISILKDLLN NIVKMEEHAD SISDFSRSSE YSTGSNGDTP
801: RRKRILKTTN AYFYWVTREQ GSFDWFKGVM NEVAELDQRG VIEMHNYLTS VYEEGDARSA LITMVQALNH AKNGVDIVSG TRVRTHFARP NWKKVLTKLS
901: SKHCNARIGV FYCGVPVLGK ELSKLCNTFN QKGSTKFEFH KEHF

Arabidopsis Description

RBOHFRespiratory burst oxidase homolog protein F [Source:UniProtKB/Swiss-Prot;Acc:O48538]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.