Factsheet for GSMUA_Achr10P17310_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 2
endoplasmic reticulum 2
vacuole 2
plasma membrane 4
golgi 2
peroxisome 1
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
TargetP:	secretory
WoLF PSORT:	cytosol
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr6P11760_001	Banana	golgi	72.94	93.14
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	34.93	61.69
GSMUA_AchrUn_...	Banana	cytosol	23.42	53.51
GSMUA_Achr6P16270_001	Banana	cytosol	85.03	51.45
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	78.69	49.16
GSMUA_Achr10P...	Banana	cytosol	86.18	48.86
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	51.82	48.56
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	70.06	43.77
GSMUA_Achr5P29250_001	Banana	cytosol	59.88	43.21
Solyc06g068680.2.1	Tomato	cytosol	70.63	42.94
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	75.62	42.78
Bra037520.1-P	Field mustard	cytosol	75.62	42.73
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	75.62	42.64
Solyc03g117980.2.1	Tomato	nucleus	76.58	42.54
KRH41026	Soybean	mitochondrion	72.36	42.45
AT5G51060.1	Thale cress	cytosol	73.7	42.43
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	76.39	42.43
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	74.66	42.24
VIT_01s0150g00450.t01	Wine grape	cytosol	74.66	42.15
KRH63901	Soybean	cytosol, nucleus, plasma membrane	75.05	42.13
Bra029194.1-P	Field mustard	cytosol	73.13	41.87
KRH59706	Soybean	cytosol	71.78	41.65
AT4G25090.1	Thale cress	cytosol	67.37	41.34
KRH54051	Soybean	cytosol, nucleus, plasma membrane	74.47	41.23
VIT_19s0014g02830.t01	Wine grape	cytosol	65.64	40.71
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	63.53	39.74
AT5G07390.1	Thale cress	cytosol	68.71	39.69
Bra009266.1-P	Field mustard	cytosol	68.52	39.58
GSMUA_Achr9P05450_001	Banana	mitochondrion	64.3	38.46
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	61.42	38.42
GSMUA_Achr6P31850_001	Banana	mitochondrion	64.11	37.44
GSMUA_Achr10P...	Banana	cytosol	59.12	36.49
GSMUA_Achr8P23680_001	Banana	mitochondrion	58.54	34.23
GSMUA_Achr3P05840_001	Banana	mitochondrion	58.35	34.16
GSMUA_AchrUn_...	Banana	cytosol	27.83	33.1
Bra011911.1-P	Field mustard	cytosol	39.35	31.83
GSMUA_Achr11P...	Banana	mitochondrion	24.57	24.43
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	9.79	23.94
GSMUA_Achr8P12260_001	Banana	peroxisome	16.51	17.2
GSMUA_Achr11P...	Banana	plasma membrane	20.73	14.77
GSMUA_Achr8P12250_001	Banana	plasma membrane	19.19	14.12
GSMUA_Achr6P11770_001	Banana	cytosol	10.36	13.43
GSMUA_Achr6P28010_001	Banana	plasma membrane, plastid	19.77	13.29
GSMUA_Achr8P12270_001	Banana	plasma membrane	19.39	11.1
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	4.22	9.65
GSMUA_Achr10P...	Banana	nucleus, plastid	2.88	5.38
Bra013862.1-P	Field mustard	cytosol	0.0	0.0

Protein Annotations

MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd
InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr10G17310_001
EnsemblPlants:GSMUA_Achr10P17310_001	EnsemblPlants:GSMUA_Achr10T17310_001	InterPro:IPR017927	UniProt:M0RJ06	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PRINTS:PR00466	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002960535	SEG:seg	:

Description

Respiratory burst oxidase homolog protein C [Source:GMGC_GENE;Acc:GSMUA_Achr10G17310_001]

Coordinates

chr10:+:24598117..24600381

Molecular Weight (calculated)

59616.1 Da

IEP (calculated)

10.224

GRAVY (calculated)

-0.123

Length

521 amino acids

Sequence
(BLAST)

001: MGYCVCVAKG GAETLKFNMA LILLPVCRNT VTWLRTKTKL GKIVPFDDNL NFHKVIAVGI AVGVGLHAIS HLTCDFPRLL HATDAEYEPM KHFFGYTRPN
101: NYWWFVKGTE GWTGVVMVVL MAVAFTLATP WFRRGRVSLP RPFNRLTGFN AFWYSHHLFV IVYILFIVHG YFLYLTKKWY KRTTWMYLAV PMILYASERL
201: IRAFRSSIRP VKIRKVAVYP GNVLALHVSK PQGFKYRSGQ YVFVNCAAVS PFQWHPFSIT SAPQDDYISV HIRTLGDWTR QLKVVFSEVC QPPTGGKSGL
301: LRADYGDSSN NRANLSFPRV LIDGPYGAPA QDYKKYEVVL LVGLGIGATP FISIVKDIVN NIKQLDNGDH KRHASTSVST SSFRTRRAYF YWVTREQDSF
401: EWFRGVMNEV AETDKKGVIE LHNYCTSVYE EGDARSALIA MLQSLNHAKH GVDVVSGTRV KSHFARPNWR NVYKRIALNH RDKRIGVFYC GAPTLTKELR
501: QLAQDFSHKT TTKFDFHKEN F

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.