Factsheet for GSMUA_Achr6P16270_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	plasma membrane	51.45	85.03
GSMUA_Achr6P11760_001	Banana	golgi	39.95	84.31
GSMUA_Achr10P...	Banana	cytosol	88.04	82.48
Os11t0537400-01	Rice	plasma membrane	3.83	75.0
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	72.01	74.34
GSMUA_Achr6P11770_001	Banana	cytosol	34.15	73.13
TraesCS4D01G324800.1	Wheat	cytosol	74.1	69.5
TraesCS5A01G499900.1	Wheat	cytosol	73.64	68.99
TraesCS4B01G327800.2	Wheat	cytosol	73.4	68.92
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	65.51	67.63
TraesCS5B01G299000.1	Wheat	cytosol	71.66	67.21
TraesCS5D01G306400.1	Wheat	cytosol	71.54	67.18
TraesCS5A01G301700.1	Wheat	cytosol	71.43	66.85
GSMUA_Achr10P...	Banana	nucleus, plastid	21.37	65.95
Zm00001d052653_P003	Maize	cytosol, plastid	73.98	65.6
HORVU4Hr1G081670.1	Barley	cytosol	73.4	64.69
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	68.53	63.85
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	68.06	63.63
Solyc03g117980.2.1	Tomato	nucleus	68.87	63.22
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	68.64	63.01
Bra037520.1-P	Field mustard	cytosol	67.36	62.91
Solyc06g068680.2.1	Tomato	cytosol	62.6	62.89
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	66.32	62.0
AT5G51060.1	Thale cress	cytosol	64.81	61.66
VIT_01s0150g00450.t01	Wine grape	cytosol	66.09	61.65
KRH41026	Soybean	mitochondrion	63.41	61.49
KRH63901	Soybean	cytosol, nucleus, plasma membrane	66.09	61.31
Bra029194.1-P	Field mustard	cytosol	64.23	60.77
TraesCS1B01G295100.1	Wheat	plasma membrane	48.2	60.76
KRH54051	Soybean	cytosol, nucleus, plasma membrane	66.32	60.68
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	20.79	60.68
Zm00001d007421_P004	Maize	cytosol	66.55	60.44
KRH59706	Soybean	cytosol	62.95	60.36
Zm00001d007430_P002	Maize	cytosol	57.26	59.98
AT4G25090.1	Thale cress	cytosol	58.54	59.36
OQU83587	Sorghum	plastid	74.1	59.13
VIT_19s0014g02830.t01	Wine grape	cytosol	57.03	58.45
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	31.01	57.92
AT5G07390.1	Thale cress	cytosol	59.58	56.87
Bra009266.1-P	Field mustard	cytosol	59.35	56.65
HORVU1Hr1G072160.5	Barley	cytosol	61.44	56.58
GSMUA_Achr9P05450_001	Banana	mitochondrion	57.03	56.37
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	54.24	56.06
GSMUA_Achr5P29250_001	Banana	cytosol	46.69	55.68
TraesCS1A01G285700.1	Wheat	cytosol	60.28	55.57
TraesCS1B01G295300.1	Wheat	cytosol	54.59	55.16
GSMUA_Achr6P31850_001	Banana	mitochondrion	57.03	55.04
Zm00001d007426_P001	Maize	cytosol, plastid	63.18	54.67
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	52.61	54.38
HORVU1Hr1G072140.1	Barley	cytosol	57.96	53.71
GSMUA_AchrUn_...	Banana	cytosol	14.17	53.51
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	34.15	52.88
TraesCS1D01G284800.1	Wheat	plastid	60.74	52.35
TraesCS1A01G357100.1	Wheat	cytosol	39.37	52.07
TraesCS1D01G285000.1	Wheat	cytosol	53.77	50.99
GSMUA_Achr10P...	Banana	cytosol	49.59	50.59
GSMUA_AchrUn_...	Banana	cytosol	25.55	50.23
HORVU5Hr1G078630.1	Barley	cytosol	56.21	50.16
GSMUA_Achr3P05840_001	Banana	mitochondrion	51.22	49.55
GSMUA_Achr8P23680_001	Banana	mitochondrion	50.17	48.48
Bra011911.1-P	Field mustard	cytosol	35.54	47.52
GSMUA_Achr11P...	Banana	mitochondrion	28.34	46.56
HORVU0Hr1G013380.4	Barley	plastid	41.23	45.17
TraesCS1D01G284900.1	Wheat	cytosol	59.23	43.97
TraesCS1B01G295200.1	Wheat	cytosol	58.65	41.29
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	9.41	38.03
Bra013862.1-P	Field mustard	cytosol	10.34	34.36
CDY22645	Canola	cytosol	8.36	31.86
GSMUA_Achr8P12250_001	Banana	plasma membrane	14.52	17.66
GSMUA_Achr8P12260_001	Banana	peroxisome	10.22	17.6
GSMUA_Achr6P28010_001	Banana	plasma membrane, plastid	15.33	17.03
GSMUA_Achr11P...	Banana	plasma membrane	14.17	16.69
GSMUA_Achr8P12270_001	Banana	plasma membrane	13.94	13.19
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	2.67	10.09

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491
GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	EnsemblPlantsGene:GSMUA_Achr6G16270_001	EnsemblPlants:GSMUA_Achr6P16270_001	EnsemblPlants:GSMUA_Achr6T16270_001
InterPro:IPR002048	InterPro:IPR017927	UniProt:M0T7H5	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI0002956B63	SEG:seg	:	:	:

Description

Respiratory burst oxidase homolog protein C [Source:GMGC_GENE;Acc:GSMUA_Achr6G16270_001]

Coordinates

chr6:+:10858299..10862557

Molecular Weight (calculated)

97412.9 Da

IEP (calculated)

9.202

GRAVY (calculated)

-0.225

Length

861 amino acids

Sequence
(BLAST)

001: MKKTGSNEEG TGSESPMYAI SAQTAGGISF SGPLTGPLGD KNGARCSVPD SPSSAATAKG TEEEEEEDGT YVEITLDVRD DAVAVHSIRR LASFGRRSGV
101: GKLDRTRSAA AHALKGLKFI SRADGAAGWA AVERRFDELA VDGNLHRSRF AQCIGMKESK DFAGELFDAL SRRRHIRGDK ITMAELREFW DQIADQSFDS
201: RLQTFFDMVD KNADGRITEE EVRKIISLSA SANNLSNIQE QAEEYAALIM EELDPENVGY IEIYNLEMLL LQAPAYSAQI GTTNSRNLSQ MLSQKLRPTR
301: EPNPLVRWYH EARYFLEDHW KRAWVMALWL GVCAGLFAWK FVQYRRRAVF HVMGYCVCVA KGGAETLKFN MALILLPVCR NTITCLRTKT RLGKVLPFDD
401: NLNFHKVIAV GVAIGVGLHA ISHLTCDFPR LLHATDQEYV PMKRFFGDTR PDDYWWFVKG TEGWTGVVMV VLMAIAFTLA SPWFRRNRLN LPTPLKRLTG
501: FNAFWYSHHL FVVVYILLII HGTFLYLTKK WYKKTTWMYL AIPVILYASE RLIRALRSSV RAVKILKVAV YPGNVLTLQM SKPQGFKCRS GQYIFVNCAA
601: VSPFQWHPFS ITSAPQDDYI SVHIRTLGDW TRQLKAVFSE VCQPPTSGQS GLLRSDHESR SSLAFPRVLI DGPYGAPAQE YKKYEVVLLV GLGIGATPFI
701: SIVKDIVNNM KQLDPDEESS DDGRTRRAYF YWVTREQGSF EWFRGVMNEV AEADKKGVIE LHNFCTSVYE EGDARSALIV MLQSLNHAKH GVDIVSGTRV
801: KSHFARPNWR NVYKRIALNH RDQRIGVFYC GAPTLTKELR QLATDFSRKT STKFDFHKEN F

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.