Factsheet for Bra020724.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
cytosol 1
mitochondrion 1
plasma membrane 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	99.89	99.89
CDY35764	Canola	cytosol, nucleus, plasma membrane	93.16	95.44
Bra037520.1-P	Field mustard	cytosol	90.01	89.91
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	89.69	89.69
GSMUA_Achr10P...	Banana	plasma membrane	42.78	75.62
Os11t0537400-01	Rice	plasma membrane	3.58	75.0
GSMUA_Achr6P11760_001	Banana	golgi	32.79	74.02
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	72.42	72.19
VIT_01s0150g00450.t01	Wine grape	cytosol	68.73	68.58
GSMUA_Achr6P16270_001	Banana	cytosol	63.63	68.06
GSMUA_Achr10P...	Banana	cytosol	65.47	65.61
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	58.74	64.87
TraesCS4B01G327800.2	Wheat	cytosol	64.28	64.56
TraesCS5B01G299000.1	Wheat	cytosol	64.28	64.49
TraesCS4D01G324800.1	Wheat	cytosol	64.28	64.49
TraesCS5A01G499900.1	Wheat	cytosol	64.28	64.42
GSMUA_Achr6P11770_001	Banana	cytosol	28.01	64.18
TraesCS5A01G301700.1	Wheat	cytosol	63.95	64.02
TraesCS5D01G306400.1	Wheat	cytosol	63.74	64.01
Bra029194.1-P	Field mustard	cytosol	62.65	63.41
Zm00001d052653_P003	Maize	cytosol, plastid	65.91	62.51
HORVU4Hr1G081670.1	Barley	cytosol	64.82	61.11
GSMUA_Achr10P...	Banana	nucleus, plastid	18.35	60.57
Bra031658.1-P	Field mustard	cytosol	54.83	59.69
Bra009266.1-P	Field mustard	cytosol	58.31	59.53
TraesCS1B01G295100.1	Wheat	plasma membrane	43.54	58.71
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	53.09	58.7
Zm00001d007421_P004	Maize	cytosol	59.5	57.81
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	28.34	56.62
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	50.92	56.3
OQU83587	Sorghum	plastid	65.69	56.07
Zm00001d007430_P002	Maize	cytosol	49.51	55.47
HORVU1Hr1G072160.5	Barley	cytosol	56.13	55.29
TraesCS1A01G285700.1	Wheat	cytosol	54.83	54.07
Zm00001d007426_P001	Maize	cytosol, plastid	56.24	52.06
Bra027764.1-P	Field mustard	mitochondrion	53.09	51.58
TraesCS1B01G295300.1	Wheat	cytosol	47.56	51.41
HORVU1Hr1G072140.1	Barley	cytosol	51.68	51.24
TraesCS1D01G284800.1	Wheat	plastid	55.05	50.75
TraesCS1A01G357100.1	Wheat	cytosol	34.96	49.46
Bra011911.1-P	Field mustard	cytosol	33.98	48.6
HORVU5Hr1G078630.1	Barley	cytosol	50.71	48.39
TraesCS1D01G285000.1	Wheat	cytosol	46.69	47.36
Bra033151.1-P	Field mustard	cytosol	36.48	45.16
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	46.36	44.48
Bra020270.1-P	Field mustard	cytosol	41.15	42.87
HORVU0Hr1G013380.4	Barley	plastid	36.16	42.37
TraesCS1D01G284900.1	Wheat	cytosol	52.99	42.07
Bra038274.1-P	Field mustard	cytosol	39.85	41.99
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	46.58	41.45
TraesCS1B01G295200.1	Wheat	cytosol	52.12	39.25
Bra013862.1-P	Field mustard	cytosol	10.53	37.45
Bra009719.1-P	Field mustard	golgi, plasma membrane	11.07	20.61
Bra029389.1-P	Field mustard	plasma membrane	14.01	18.48
Bra032641.1-P	Field mustard	plasma membrane	13.57	18.01
Bra023239.1-P	Field mustard	plasma membrane	13.68	17.33
Bra037329.1-P	Field mustard	cytosol, peroxisome, plasma membrane	13.25	16.9
Bra033252.1-P	Field mustard	golgi, plasma membrane	12.49	16.43
Bra032640.1-P	Field mustard	plasma membrane	12.92	16.41
Bra037953.1-P	Field mustard	plasma membrane	12.7	15.81

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EnsemblPlantsGene:Bra020724	EnsemblPlants:Bra020724.1
EnsemblPlants:Bra020724.1-P	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869
InterPro:IPR002048	InterPro:IPR017927	UniProt:M4DW30	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF94	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	UniParc:UPI0002546146	SEG:seg	:	:	:

Description

AT5G47910 (E=0.0) RBOHD, ATRBOHD | RBOHD (RESPIRATORY BURST OXIDASE HOMOLOGUE D); NAD(P)H oxidase

Coordinates

chrA02:+:23498575..23503039

Molecular Weight (calculated)

104498.0 Da

IEP (calculated)

9.633

GRAVY (calculated)

-0.257

Length

921 amino acids

Sequence
(BLAST)

001: MRRGSSGNDH ELGILRRTNS DTKSDNETIP SNRSAFSGPL GRPKRASKKN ARFAADLPRR SNSISGVGGR EDDEYVEITL DIRDDSVAVH SVQQASPGGP
101: QNLEDPELTL LTKKTLESSL NKSSSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVEERFD KLSLDSNGLL
201: LSSKFWECLG MNKESKDFAD QLFRALAHRN NISGDAITKD QLRFFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGYIMIE NLEMLLLQAP NQSVRIGDSR ILSQMLSQKL KPTTESNPLV RWSEKIKYFV IDNWQRIWIM MLWLAICAGL FTYKFIEYRN
401: NKDAFGVMRY CVCVAKGGAE TLKFNMALIL LPVCRNTITW LRNKTKLGVV VPFDDNLNFH KVIASGIVVG VLLHVVSHLA CDFPRLLAAD EETYEPMVQY
501: FGEQPESYWH FVKEVEGWTG IVMVVLMVIA FTLATPWFRR NKLNLPNFLK KLTGFNAFWY SHHLFIIVYT LLIVHGIKLY LTKIWYKKTT WMYLAVPILL
601: YGSERLIRAF RSSIKPVKIV KVAVYPGNAL SLHMTKPQGF KYKSGQYMFV NCRAVSPFEW HPFSITSAPG DDYVSVHIRT LGDWTRKLKT VFSEVCKPPT
701: AGKSGLLRAD GGDSIAFPKI LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKSRDRDSD IENNSSNGNS KGFRTRKAYF YWVTREQGSF
801: EWFKGIMDEV SELDDEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKRIAVQH PDKRIGVFYC GAPGLTKDLK
901: NLALDFSRKT STKFDFHKEN F

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.