Factsheet for Bra038274.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plasma membrane
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	plasma membrane
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX86059	Canola	peroxisome, plasma membrane, plastid	39.02	87.21
AT3G45810.1	Thale cress	cytosol	85.13	81.58
CDX99140	Canola	cytosol, peroxisome, plasma membrane	78.6	81.4
Bra020270.1-P	Field mustard	cytosol	78.26	77.38
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	22.88	67.8
GSMUA_AchrUn_...	Banana	cytosol	16.02	61.4
Solyc06g075570.1.1	Tomato	cytosol	55.95	58.92
PGSC0003DMT400040179	Potato	cytosol	52.17	58.76
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	55.72	58.39
VIT_06s0004g03790.t01	Wine grape	nucleus	56.64	58.1
GSMUA_Achr5P29250_001	Banana	cytosol	47.83	57.89
KRH49079	Soybean	cytosol	56.06	57.04
Os01t0835500-01	Rice	cytosol	54.0	55.99
Zm00001d009349_P004	Maize	plastid	52.17	55.47
Solyc11g072800.1.1	Tomato	cytosol	51.72	55.39
OQU87817	Sorghum	cytosol	53.78	55.04
TraesCS3D01G347900.2	Wheat	cytosol	53.09	54.78
TraesCS1D01G289300.2	Wheat	mitochondrion	50.0	54.62
TraesCS3B01G386600.1	Wheat	cytosol	53.09	54.59
TraesCS1A01G290700.2	Wheat	mitochondrion	49.89	54.5
TraesCS3A01G354200.2	Wheat	cytosol	52.97	54.41
Os05t0465800-01	Rice	plasma membrane	50.92	54.33
KXG32613	Sorghum	cytosol, plastid	51.37	54.29
Zm00001d040974_P002	Maize	cytosol, peroxisome, plasma membrane, plastid	51.83	53.8
HORVU3Hr1G087210.4	Barley	peroxisome, plastid	53.2	53.7
Zm00001d042961_P002	Maize	plasma membrane	53.89	53.34
GSMUA_Achr10P...	Banana	cytosol	51.14	52.96
TraesCS1B01G300000.2	Wheat	mitochondrion	50.46	49.55
GSMUA_Achr11P...	Banana	mitochondrion	29.41	49.05
GSMUA_AchrUn_...	Banana	cytosol	23.57	47.03
HORVU1Hr1G071340.13	Barley	mitochondrion, peroxisome, plastid	51.03	44.11
Bra031658.1-P	Field mustard	cytosol	42.68	44.09
Bra027764.1-P	Field mustard	mitochondrion	46.0	42.41
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	38.9	40.82
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	38.56	40.46
Bra029194.1-P	Field mustard	cytosol	41.88	40.22
Bra037520.1-P	Field mustard	cytosol	42.33	40.13
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	41.99	39.85
Bra009266.1-P	Field mustard	cytosol	40.85	39.58
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	41.65	37.92
Bra033151.1-P	Field mustard	cytosol	31.35	36.83
Bra011911.1-P	Field mustard	cytosol	26.32	35.71
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	41.53	35.07
Bra013862.1-P	Field mustard	cytosol	6.86	23.17
Bra009719.1-P	Field mustard	golgi, plasma membrane	10.07	17.78
Bra023239.1-P	Field mustard	plasma membrane	13.73	16.51
Bra029389.1-P	Field mustard	plasma membrane	12.93	16.19
Bra032641.1-P	Field mustard	plasma membrane	12.47	15.71
Bra033252.1-P	Field mustard	golgi, plasma membrane	12.36	15.43
Bra037953.1-P	Field mustard	plasma membrane	12.93	15.27
Bra032640.1-P	Field mustard	plasma membrane	12.59	15.17
Bra037329.1-P	Field mustard	cytosol, peroxisome, plasma membrane	11.44	13.85

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	EnsemblPlantsGene:Bra038274	EnsemblPlants:Bra038274.1
EnsemblPlants:Bra038274.1-P	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0004601
GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869
InterPro:IPR002048	InterPro:IPR017927	UniProt:M4FB08	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022
PFAM:PF08030	PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384
PANTHER:PTHR11972	PANTHER:PTHR11972:SF54	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF52343
SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI000253EE93	SEG:seg	:	:

Description

AT5G60010 (E=0.0) | FAD binding / calcium ion binding / electron carrier/ iron ion binding / oxidoreductase/ oxidoreductase, acting on NADH or NADPH, with oxygen as acceptor / peroxidase/ superoxide-generating NADPH oxidase

Coordinates

chrA06:+:11334108..11339888

Molecular Weight (calculated)

98925.7 Da

IEP (calculated)

9.421

GRAVY (calculated)

-0.249

Length

874 amino acids

Sequence
(BLAST)

001: MKNNRNVDSS KQMLEGVEID PNGENTTNSN NAESSGGGIL KNVSRNLGVG SIIRSIKKSG NLGLHNTRKS GNLGPTLPVA LEKKQGPQRV ERTTSSAARG
101: LQSLRFLDRT VTGRERDSWR SIENRFNQFA VDGKLPKEKF GICIGMGDTL EFAGEVYEAL SRRRQMNTEN GIDKEQLKLF WEDMIKKDLD CRLQIFFDMC
201: DKDGDGKLTE EEVKEVMVLS ASANRLANLK KNAASYASLI MEELDPDHHG YIEMWQLEVL LTGMVANPAD NKKMVRKSET LTRAMIPERY RTPTSKYVSV
301: TAELMLEHWK KIWVVILWLV VNACLFTWKY TEFSSNPLYN IAGRCVSVAK GTAEMLKFNM ALVLVPVLRR TLTFLRSSFL SHVIPFDDNI NFHKLIAVAI
401: ALTSLLHTAL HLLCNYPRLS TCPYDVYSEY GGKLLGHKQP TYLGLMLTPV TVTGLLMIVF MCISFTLAMH YFRRNIVKLP KPFNVLAGFN SFWYAHHLLV
501: VVYALLIIHG YILIIEKPWY QKTNLDMDVR GCTYGVVRER KAFLASSRTQ PSCPHYQGNV LALYMTKPQG FKYKSGMYMF VKCPDISKFE WHPFSVTSAP
601: GDEYLSVHIR ALGDWTSELR NRFAETCEPP QASKPGPNNL VRMETRARGE NPHIEESQIL FPQIFIKGPY GAPAQNYEKF DILLLIGLGI GATPFISILK
701: DMLNNLKPGT PKPGQRGEGS VGSESLGGSS VNGGRKFPQR AYFYWVTREQ ASFEWFKGVM DDIAVYDKNN VIEMHNYLTS MYEAGDARSA LIAMVQKLQH
801: AKNGVDIVSE SRIRTHFARP NWRKVFSELS SKHETSRIGV FYCGSPALVR PLNSLCQEFS LESSTRFTFH KENF

Best Arabidopsis Sequence Match ( AT3G45810.1 )
(BLAST)

001: MKNNKKVGTE DSTKWMLESV EIDPKGDSSV KQPESTINSN NPESSGAGGG ILKNVSKNLA VGSIIRSMSV NKWRKSGNLG SPSTRKSGNL GPPLPVSQVK
101: RPGPQRVERT TSSAARGLQS LRFLDRTVTG RERDSWRSIE NRFNQFAVDG RLPKDKFGVC IGMGDTLEFA AKVYEALGRR RQIKTENGID KEQLKLFWED
201: MIKKDLDCRL QIFFDMCDKD GDGKLTEEEV KEVIVLSASA NRLVNLKKNA ASYASLIMEE LDPNEQGYIE MWQLEVLLTG IVSNADSHKV VRKSQQLTRA
301: MIPKRYRTPT SKYVVVTAEL MYEHWKKIWV VTLWLAVNVV LFMWKYEEFT TSPLYNITGR CLCAAKGTAE ILKLNMALIL VPVLRRTLTF LRSTFLNHLI
401: PFDDNINFHK LIAVAIAVIS LLHTALHMLC NYPRLSSCPY NFYSDYAGNL LGAKQPTYLG LMLTPVSVTG VLMIIFMGIS FTLAMHYFRR NIVKLPIPFN
501: RLAGFNSFWY AHHLLVIAYA LLIIHGYILI IEKPWYQKTT WMYVAIPMVL YASERLFSRV QEHNHRVHII KAIVYSGNVL ALYMTKPQGF KYKSGMYMFV
601: KCPDISKFEW HPFSITSAPG DEYLSVHIRA LGDWTSELRN RFAETCEPHQ KSKPSPNDLI RMETRARGAN PHVEESQALF PRIFIKGPYG APAQSYQKFD
701: ILLLIGLGIG ATPFISILKD MLNNLKPGIP KTGQKYEGSV GGESLGGSSV YGGSSVNGGG SVNGGGSVSG GGRKFPQRAY FYWVTREQAS FEWFKGVMDD
801: IAVYDKTNVI EMHNYLTSMY EAGDARSALI AMVQKLQHAK NGVDIVSESR IRTHFARPNW RKVFSELSNK HETSRIGVFY CGSPTLVRPL KSLCQEFSLE
901: SSTRFTFHKE NF

Arabidopsis Description

RBOHJPutative respiratory burst oxidase homolog protein J [Source:UniProtKB/Swiss-Prot;Acc:Q9LZU9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.