Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G354200.2 | Wheat | cytosol | 99.06 | 98.94 |
| TraesCS3D01G347900.2 | Wheat | cytosol | 98.59 | 98.94 |
| HORVU3Hr1G087210.4 | Barley | peroxisome, plastid | 97.53 | 95.73 |
| Os01t0835500-01 | Rice | cytosol | 88.35 | 89.09 |
| OQU87817 | Sorghum | cytosol | 88.24 | 87.82 |
| Zm00001d042961_P002 | Maize | plasma membrane | 87.65 | 84.37 |
| GSMUA_AchrUn_... | Banana | cytosol | 20.0 | 74.56 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.47 | 70.78 |
| TraesCS1B01G300000.2 | Wheat | mitochondrion | 70.94 | 67.75 |
| PGSC0003DMT400040179 | Potato | cytosol | 57.29 | 62.76 |
| Solyc06g075570.1.1 | Tomato | cytosol | 60.47 | 61.93 |
| VIT_06s0004g03790.t01 | Wine grape | nucleus | 61.65 | 61.5 |
| PGSC0003DMT400078138 | Potato | cytosol, nucleus, plastid | 60.24 | 61.39 |
| CDX86059 | Canola | peroxisome, plasma membrane, plastid | 27.53 | 59.85 |
| Solyc11g072800.1.1 | Tomato | cytosol | 57.29 | 59.68 |
| KRH49079 | Soybean | cytosol | 58.82 | 58.21 |
| AT5G60010.1 | Thale cress | cytosol | 57.29 | 54.97 |
| Bra020270.1-P | Field mustard | cytosol | 56.94 | 54.75 |
| CDY09233 | Canola | cytosol | 56.94 | 54.75 |
| Bra038274.1-P | Field mustard | cytosol | 54.59 | 53.09 |
| AT3G45810.1 | Thale cress | cytosol | 56.35 | 52.52 |
| TraesCS4B01G358800.1 | Wheat | cytosol | 47.88 | 48.05 |
| TraesCS3B01G314000.2 | Wheat | mitochondrion | 52.71 | 47.46 |
| TraesCS1B01G295100.1 | Wheat | plasma membrane | 38.12 | 47.44 |
| CDX99140 | Canola | cytosol, peroxisome, plasma membrane | 46.71 | 47.04 |
| TraesCS4B01G327800.2 | Wheat | cytosol | 50.47 | 46.78 |
| TraesCS5B01G299000.1 | Wheat | cytosol | 49.76 | 46.08 |
| TraesCS5B01G099700.1 | Wheat | cytosol | 47.29 | 46.05 |
| TraesCS3B01G212900.5 | Wheat | cytosol | 48.59 | 45.89 |
| TraesCS1B01G362200.1 | Wheat | mitochondrion | 52.24 | 45.68 |
| TraesCS6B01G205000.1 | Wheat | mitochondrion | 49.76 | 44.2 |
| TraesCS5B01G212100.1 | Wheat | mitochondrion | 50.94 | 43.96 |
| TraesCS1B01G295300.1 | Wheat | cytosol | 42.12 | 42.02 |
| TraesCS1B01G293900.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.88 | 39.8 |
| TraesCS1B01G295200.1 | Wheat | cytosol | 44.12 | 30.66 |
| TraesCS2B01G414300.1 | Wheat | plasma membrane | 15.06 | 17.7 |
| TraesCS2B01G329600.1 | Wheat | plasma membrane | 14.71 | 16.73 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:10.1.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | ncoils:Coil | InterPro:Cyt_b245_heavy_chain |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom |
| InterPro:Fe_red_NAD-bd_6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0050664 |
| GO:GO:0055114 | InterPro:IPR002048 | InterPro:IPR017927 | InterPro:NADPH_Ox | PFAM:PF01794 | PFAM:PF08022 |
| PFAM:PF08030 | PFAM:PF08414 | PRINTS:PR00466 | ScanProsite:PS00018 | PFscan:PS50222 | PFscan:PS51384 |
| PANTHER:PTHR11972 | PANTHER:PTHR11972:SF68 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF47473 | SUPFAM:SSF52343 | SUPFAM:SSF63380 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G386600 | EnsemblPlants:TraesCS3B01G386600.1 | TIGR:cd06186 | SEG:seg | : |
Description
No Description!
Coordinates
chr3B:+:607380125..607384314
Molecular Weight (calculated)
95666.1 Da
IEP (calculated)
9.892
GRAVY (calculated)
-0.153
Length
850 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPGRGYAD RAAPPLDGIT VDGGGGRTPP PAGLPRPPGF RGLMQQPSRL ASGVRQFASR VSMKVPEVVP GIRPGGGRMT RMQSSAQMGL KGLRFLDKTS
101: GSKEGWKAVE RRFDEMSKAS GRLPKESFGK CIGMGDSKEF AGELFVTLSR RRSIEPEQGI TKEQLREFWT EMTDQNFDSR LRIFFDMCDK NGDGMLTEDE
201: VKEVIILSAS ANKLAKLKSH AATYSSLIME ELDPDDRGYI EIWQLETLLR GMVSAQAPEV KLKRTTSSLA RTMIPMRYRS PLKRHVTRTM DFIHENWKRI
301: WLVTLWLAAN LALFVYKFEQ YKHRSSFQVM GNCVCVAKGA AETLKLNMAL ILLPVCRNTL TTLRSTALSH VIPFDDNINF HKVLAGAIAV GTVVHTLAHV
401: TCDFPRLISC PSDKFMALLG PNFGFRQPTY PDLLASAPGV TGILMIIIMT FSFTLAMHTF RRSVVKLPSP LHHLAGFNAF WYAHHLLLLV YVLLVVHSYF
501: IFLTRIWYKK TTWMFLIVPV LFYACERIIR KVRENNYHVN ILKAAIYPGN VLSLHMKKPP GFKYKSGMYL FVKCPDVSPF EWHPFSITSA PGDDYLSVHI
601: RTLGDWTSEL RSLFGKCCEA QVTSKKATLS RLETTVVADS ATEDTRFPKV FIDGPYGAPA QNYKKYDILL LIGLGIGATP FISILKDLLN NIKSNDEVES
701: IHGSEIGSFK NSGPGRAYFY WVTREQGSFD WFKGVMNEVA DNDHSNVIEM HNYLTSVYEE GDARSALIAM VQSLQHAKNG VDIVSGSKIR THFARPNWRK
801: VFSDLANAHK NSRIGVFYCG SPTLTKQLKD LSKEFSQTTT TRFHFHKENF
101: GSKEGWKAVE RRFDEMSKAS GRLPKESFGK CIGMGDSKEF AGELFVTLSR RRSIEPEQGI TKEQLREFWT EMTDQNFDSR LRIFFDMCDK NGDGMLTEDE
201: VKEVIILSAS ANKLAKLKSH AATYSSLIME ELDPDDRGYI EIWQLETLLR GMVSAQAPEV KLKRTTSSLA RTMIPMRYRS PLKRHVTRTM DFIHENWKRI
301: WLVTLWLAAN LALFVYKFEQ YKHRSSFQVM GNCVCVAKGA AETLKLNMAL ILLPVCRNTL TTLRSTALSH VIPFDDNINF HKVLAGAIAV GTVVHTLAHV
401: TCDFPRLISC PSDKFMALLG PNFGFRQPTY PDLLASAPGV TGILMIIIMT FSFTLAMHTF RRSVVKLPSP LHHLAGFNAF WYAHHLLLLV YVLLVVHSYF
501: IFLTRIWYKK TTWMFLIVPV LFYACERIIR KVRENNYHVN ILKAAIYPGN VLSLHMKKPP GFKYKSGMYL FVKCPDVSPF EWHPFSITSA PGDDYLSVHI
601: RTLGDWTSEL RSLFGKCCEA QVTSKKATLS RLETTVVADS ATEDTRFPKV FIDGPYGAPA QNYKKYDILL LIGLGIGATP FISILKDLLN NIKSNDEVES
701: IHGSEIGSFK NSGPGRAYFY WVTREQGSFD WFKGVMNEVA DNDHSNVIEM HNYLTSVYEE GDARSALIAM VQSLQHAKNG VDIVSGSKIR THFARPNWRK
801: VFSDLANAHK NSRIGVFYCG SPTLTKQLKD LSKEFSQTTT TRFHFHKENF
001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF
Arabidopsis Description
RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.