Factsheet for TraesCS1B01G295300.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G285000.1	Wheat	cytosol	87.68	82.27
TraesCS1B01G295100.1	Wheat	plasma membrane	54.58	68.08
TraesCS4B01G327800.2	Wheat	cytosol	64.44	59.87
Os11t0537400-01	Rice	plasma membrane	3.05	59.09
GSMUA_Achr6P11760_001	Banana	golgi	28.05	58.58
TraesCS5B01G299000.1	Wheat	cytosol	62.44	57.95
Zm00001d007430_P002	Maize	cytosol	53.4	55.35
GSMUA_Achr6P16270_001	Banana	cytosol	55.16	54.59
Zm00001d052653_P003	Maize	cytosol, plastid	61.62	54.07
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	52.46	53.6
TraesCS1B01G295200.1	Wheat	cytosol	74.53	51.92
GSMUA_Achr10P...	Banana	cytosol	55.87	51.8
GSMUA_Achr6P11770_001	Banana	cytosol	24.3	51.49
Zm00001d007421_P004	Maize	cytosol	55.87	50.21
TraesCS4B01G358800.1	Wheat	cytosol	48.71	49.0
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	47.42	48.5
Solyc06g068680.2.1	Tomato	cytosol	48.59	48.31
OQU83587	Sorghum	plastid	60.92	48.1
VIT_19s0014g02830.t01	Wine grape	cytosol	47.3	47.98
AT4G25090.1	Thale cress	cytosol	47.77	47.94
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	51.76	47.88
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	51.64	47.62
Bra037520.1-P	Field mustard	cytosol	51.53	47.61
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	51.41	47.56
Zm00001d007426_P001	Maize	cytosol, plastid	55.52	47.54
KRH63901	Soybean	cytosol, nucleus, plasma membrane	51.64	47.41
TraesCS5B01G099700.1	Wheat	cytosol	48.36	47.19
VIT_01s0150g00450.t01	Wine grape	cytosol	50.82	46.91
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	51.64	46.91
TraesCS3B01G212900.5	Wheat	cytosol	49.53	46.89
AT5G51060.1	Thale cress	cytosol	49.77	46.85
Solyc03g117980.2.1	Tomato	nucleus	51.41	46.7
KRH41026	Soybean	mitochondrion	48.59	46.62
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	45.54	46.58
AT5G07390.1	Thale cress	cytosol	49.18	46.45
Bra029194.1-P	Field mustard	cytosol	49.53	46.37
KRH54051	Soybean	cytosol, nucleus, plasma membrane	51.17	46.33
KRH59706	Soybean	cytosol	48.83	46.33
Bra009266.1-P	Field mustard	cytosol	48.94	46.23
TraesCS3B01G386600.1	Wheat	cytosol	42.02	42.12
TraesCS3B01G314000.2	Wheat	mitochondrion	46.01	41.53
TraesCS1B01G300000.2	Wheat	mitochondrion	42.61	40.79
TraesCS1B01G362200.1	Wheat	mitochondrion	46.24	40.53
TraesCS6B01G205000.1	Wheat	mitochondrion	43.43	38.66
TraesCS5B01G212100.1	Wheat	mitochondrion	44.48	38.48
Bra011911.1-P	Field mustard	cytosol	28.99	38.35
TraesCS1B01G293900.1	Wheat	cytosol, peroxisome, plasma membrane	32.86	34.61
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.22	32.86
Bra013862.1-P	Field mustard	cytosol	9.15	30.12
CDY22645	Canola	cytosol	5.63	21.24
TraesCS2B01G329600.1	Wheat	plasma membrane	13.26	15.13
TraesCS2B01G414300.1	Wheat	plasma membrane	12.32	14.52

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	ncoils:Coil	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150
GO:GO:0008152	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	InterPro:IPR002048	InterPro:IPR017927
InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFAM:PF08414	ScanProsite:PS00018
PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473
SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS1B01G295300	EnsemblPlants:TraesCS1B01G295300.1	TIGR:cd00051
TIGR:cd06186	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr1B:+:513463962..513479371

Molecular Weight (calculated)

96521.3 Da

IEP (calculated)

9.645

GRAVY (calculated)

-0.310

Length

852 amino acids

Sequence
(BLAST)

001: MPSRVGADDT GGGPGVGEIV EASSGARERD VPPGNRSATR KTARFVEPMP APRGGGPSRL DRSMSSVPAL ALEGLKFISE TDASKGWTSA AGFFDSNAQN
101: DLLPRSMFGE CIGMKEVAFA GELFDTLARR RGISGDSIDK AELREFWDQI SDPSFKSRLQ LFFDMMDKNA DGKISEAEVK QIITLSASAN HLTITAQQSE
201: EYDKLIMEEL DPHGHGYIEL HSLEMLLLKP LSETMTKGGK VAEPNWHKQL YRRARYFLKD NWRRCWVMLL WLSICTGLFT WKFMQYRHRV VFKVMGYCVC
301: VAKGGAETLK FNMALTLLPM CRNAVTWLRS RTTLGRFVPF NDNLNFHKVI AVGISVGAGL HIISHLTCDF PRLVHATDDE YEPMKPFFGD VKPPNYWWFL
401: KGTEGWTGLV MLVLMAITFT LATGRFRKRE LRRPKPKKSK SLVESKNPNS LPGLLGRLTR SVSASHNRLT MIINALFNRF TGYNAFLYTH HLFVIVYALL
501: IVHGHFLYLT KKWQKKTTWM YLTVPIVVYA CERLTRTLRS RVRLVEKIKV AVHPHPASLL SLHMSKPEGF RFKGGQYIFI KCPGVSKFEW HPFSITSAPE
601: DDCVNVHIKA LGDWTEDLRD AFLKVCPNTE GKNEIRQVEY DRDDAKSDPS SPHLKNNPSS ATDKQYDVVL LVGLGIGATP MISIIKDIIN NTKRLGDIES
701: VNPVPGDASP SASFKTRRAY FYWTTREQGS FEWFRGIMDE VAETDEDGII KLHTHCTSVH KEGDARSAPL TILQSLYYAK HGIDIISGSR VKTTFGRANW
801: REAYERIAQE NQGKRVGVFY CGMPTLTNEL RYLAKDLSRK TRTQFEFHKE NF

Best Arabidopsis Sequence Match ( AT1G09090.2 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVCQL PSTSQSGLFI ADIGQANNIT RFPRLLIDGP YGAPAQDYRN YDVLLLVGLG IGATPLISII RDVLNNIKNQ NSIERGTNQH
701: IKNYVATKRA YFYWVTREQG SLEWFSEVMN EVAEYDSEGM IELHNYCTSV YEEGDARSAL ITMLQSLHHA KSGIDIVSGT RVRTHFARPN WRSVFKHVAV
801: NHVNQRVGVF YCGNTCIIGE LKRLAQDFSR KTTTKFEFHK ENF

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.