Factsheet for GSMUA_Achr6P11770_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
plasma membrane 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	nucleus, plastid	48.01	69.18
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	79.1	38.13
Bra013862.1-P	Field mustard	cytosol	24.13	37.45
GSMUA_Achr6P16270_001	Banana	cytosol	73.13	34.15
GSMUA_Achr10P...	Banana	cytosol	75.62	33.08
GSMUA_Achr11P...	Banana	mitochondrion	41.29	31.68
TraesCS5A01G499900.1	Wheat	cytosol	71.64	31.34
TraesCS4D01G324800.1	Wheat	cytosol	71.39	31.26
TraesCS4B01G327800.2	Wheat	cytosol	71.14	31.19
Zm00001d052653_P003	Maize	cytosol, plastid	73.13	30.28
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	69.15	30.09
GSMUA_Achr5P26970_001	Banana	cytosol, peroxisome, plasma membrane	61.94	29.86
TraesCS5B01G299000.1	Wheat	cytosol	67.91	29.74
TraesCS5D01G306400.1	Wheat	cytosol	67.66	29.66
TraesCS5A01G301700.1	Wheat	cytosol	67.66	29.57
HORVU4Hr1G081670.1	Barley	cytosol	70.4	28.97
HORVU5Hr1G078630.1	Barley	cytosol	69.4	28.91
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	67.41	28.89
Solyc03g117980.2.1	Tomato	nucleus	67.16	28.78
HORVU0Hr1G013380.4	Barley	plastid	55.22	28.24
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	64.43	28.12
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	64.18	28.01
CDY22645	Canola	cytosol	15.67	27.88
Bra037520.1-P	Field mustard	cytosol	63.68	27.77
VIT_01s0150g00450.t01	Wine grape	cytosol	63.18	27.52
Zm00001d007421_P004	Maize	cytosol	63.93	27.11
OQU83587	Sorghum	plastid	72.64	27.06
VIT_19s0014g02830.t01	Wine grape	cytosol	54.73	26.19
TraesCS1A01G285700.1	Wheat	cytosol	60.7	26.12
Solyc06g068680.2.1	Tomato	cytosol	55.47	26.02
Zm00001d007430_P002	Maize	cytosol	52.99	25.91
HORVU1Hr1G072160.5	Barley	cytosol	60.2	25.88
KRH63901	Soybean	cytosol, nucleus, plasma membrane	58.96	25.54
AT5G51060.1	Thale cress	cytosol	57.46	25.52
GSMUA_AchrUn_...	Banana	cytosol	27.61	25.34
Bra029194.1-P	Field mustard	cytosol	57.21	25.27
KRH54051	Soybean	cytosol, nucleus, plasma membrane	58.96	25.19
KRH41026	Soybean	mitochondrion	55.22	25.0
Zm00001d007426_P001	Maize	cytosol, plastid	61.44	24.82
TraesCS1D01G284800.1	Wheat	plastid	61.44	24.72
KRH59706	Soybean	cytosol	55.22	24.72
TraesCS1B01G295300.1	Wheat	cytosol	51.49	24.3
GSMUA_Achr9P05450_001	Banana	mitochondrion	52.24	24.11
HORVU1Hr1G072140.1	Barley	cytosol	55.47	24.0
AT5G07390.1	Thale cress	cytosol	53.48	23.84
TraesCS1A01G357100.1	Wheat	cytosol	38.56	23.81
AT4G25090.1	Thale cress	cytosol	50.0	23.67
GSMUA_Achr6P31850_001	Banana	mitochondrion	51.99	23.43
Bra009266.1-P	Field mustard	cytosol	52.24	23.28
TraesCS1D01G285000.1	Wheat	cytosol	52.24	23.13
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	46.02	22.21
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	45.27	21.85
GSMUA_Achr10P...	Banana	cytosol	43.28	20.62
GSMUA_Achr3P05840_001	Banana	mitochondrion	45.02	20.34
GSMUA_Achr8P23680_001	Banana	mitochondrion	44.53	20.09
TraesCS1D01G284900.1	Wheat	cytosol	57.46	19.91
GSMUA_Achr5P29250_001	Banana	cytosol	34.58	19.25
TraesCS1B01G295100.1	Wheat	plasma membrane	32.09	18.89
TraesCS1B01G295200.1	Wheat	cytosol	56.72	18.64
Bra011911.1-P	Field mustard	cytosol	26.12	16.3
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.21	15.49
GSMUA_Achr9P07100_001	Banana	mitochondrion, plasma membrane	15.67	11.33
GSMUA_Achr10P...	Banana	plasma membrane	13.43	10.36
Os11t0537400-01	Rice	plasma membrane	0.75	6.82
GSMUA_Achr8P12250_001	Banana	plasma membrane	7.71	4.38
GSMUA_Achr6P28010_001	Banana	plasma membrane, plastid	7.96	4.13
GSMUA_Achr11P...	Banana	plasma membrane	7.46	4.1
GSMUA_Achr8P12270_001	Banana	plasma membrane	6.47	2.86
GSMUA_AchrUn_...	Banana	cytosol	1.0	1.75
GSMUA_Achr8P12260_001	Banana	peroxisome	0.5	0.4
GSMUA_Achr11P...	Banana	cytosol, mitochondrion, peroxisome	0.25	0.34
GSMUA_Achr6P11760_001	Banana	golgi	0.25	0.25
HORVU1Hr1G091930.1	Barley	peroxisome, plasma membrane	0.25	0.22
GSMUA_Achr8P12300_001	Banana	extracellular, peroxisome, plastid	0.0	0.0

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	InterPro:EF-hand-dom_pair	InterPro:EF_hand_dom	GO:GO:0003674	GO:GO:0003824
GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869
EnsemblPlantsGene:GSMUA_Achr6G11770_001	EnsemblPlants:GSMUA_Achr6P11770_001	EnsemblPlants:GSMUA_Achr6T11770_001	InterPro:IPR002048	UniProt:M0T675	InterPro:NADPH_Ox
PFAM:PF08414	PFscan:PS50222	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64	SUPFAM:SSF47473	TMHMM:TMhelix
UniParc:UPI0002948030	SEG:seg	:	:	:	:

Description

Respiratory burst oxidase homolog protein C [Source:GMGC_GENE;Acc:GSMUA_Achr6G11770_001]

Coordinates

chr6:-:7797462..7799205

Molecular Weight (calculated)

45428.3 Da

IEP (calculated)

8.263

GRAVY (calculated)

-0.366

Length

402 amino acids

Sequence
(BLAST)

001: MGTDDDGYQA SDMVETESVG SDRVGFSGPL SKRGSRKSAR FNLPASSAAA GEDDEAYVEI TLDVRDDTVA VHSVSQELRR LASVTKRPTA GGKVDRSRSA
101: AAHALKGLKF ITKTDGAAGW LAVEKRFDEL AADGALPRSL FAQCIGMKES KEFAGELFDA LARRRHITGD KITKAELREF WEQISDQSFD SRLQTFFDMV
201: DKNLDGRITE EEVKEIITLS ASANKLSKIK EQAEEYARLI MEELDPNDLG YIEIYNLEML LLQAPTQSMN IGTTNSRNLS QLLSQKLRPT QEPNPLRRWY
301: QRARYFLEDN WQRVWVMALW LCICAGLFAW KFVQYRHRAV YHVMGYCVCV AKGGAETLKF NMALILLPVC RNTVTWLRTK TKLGKVVPFD DNLNFHKAVK
401: CR

Best Arabidopsis Sequence Match ( AT1G09090.1 )
(BLAST)

001: MREEEMESSS EGETNKISRC KATGSDNPDE DYVEITLEVR DETINTMKAK ATLRSVLSGR LKTMVKSLSF ASRRLDRSKS FGAMFALRGL RFIAKNDAVG
101: RGWDEVAMRF DKLAVEGKLP KSKFGHCIGM VESSEFVNEL FEALVRRRGT TSSSITKTEL FEFWEQITGN SFDDRLQIFF DMVDKNLDGR ITGDEVKEII
201: ALSASANKLS KIKENVDEYA ALIMEELDRD NLGYIELHNL ETLLLQVPSQ SNNSPSSANK RALNKMLSQK LIPTKDRNPV KRFAMNISYF FLENWKRIWV
301: LTLWISICIT LFTWKFLQYK RKTVFEVMGY CVTVAKGSAE TLKFNMALIL LPVCRNTITW LRTKSKLIGS VVPFDDNINF HKVVAFGIAV GIGLHAISHL
401: ACDFPRLLHA KNVEFEPMKK FFGDERPENY GWFMKGTDGW TGVTMVVLML VAYVLAQSWF RRNRANLPKS LKRLTGFNAF WYSHHLFVIV YVLLIVHGYF
501: VYLSKEWYHK TTWMYLAVPV LLYAFERLIR AFRPGAKAVK VLKVAVYPGN VLSLYMSKPK GFKYTSGQYI YINCSDVSPL QWHPFSITSA SGDDYLSVHI
601: RTLGDWTSQL KSLYSKVTIF QE

Arabidopsis Description

RBOHBRespiratory burst oxidase homolog protein B [Source:UniProtKB/Swiss-Prot;Acc:Q9SBI0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.