Factsheet for TraesCS4D01G324800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G327800.2	Wheat	cytosol	99.13	99.24
TraesCS5A01G499900.1	Wheat	cytosol	98.37	98.26
HORVU4Hr1G081670.1	Barley	cytosol	95.97	90.17
TraesCS5D01G306400.1	Wheat	cytosol	84.64	84.73
Os11t0537400-01	Rice	plasma membrane	3.92	81.82
GSMUA_Achr6P11760_001	Banana	golgi	36.27	81.62
Zm00001d052653_P003	Maize	cytosol, plastid	84.31	79.71
GSMUA_Achr6P16270_001	Banana	cytosol	69.5	74.1
GSMUA_Achr10P...	Banana	cytosol	72.44	72.36
GSMUA_Achr2P21340_001	Banana	cytosol, peroxisome, plasma membrane	65.03	71.58
GSMUA_Achr6P11770_001	Banana	cytosol	31.26	71.39
OQU83587	Sorghum	plastid	83.77	71.27
Zm00001d007421_P004	Maize	cytosol	71.68	69.41
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	68.41	66.95
Solyc03g117980.2.1	Tomato	nucleus	67.97	66.52
Zm00001d007430_P002	Maize	cytosol	59.48	66.42
VIT_01s0150g00440.t01	Wine grape	cytosol, peroxisome, plasma membrane, plastid	66.01	65.58
Solyc06g068680.2.1	Tomato	cytosol	60.35	64.64
Bra020724.1-P	Field mustard	cytosol, nucleus, plasma membrane, plastid	64.49	64.28
TraesCS1D01G284800.1	Wheat	plastid	69.93	64.26
Bra037520.1-P	Field mustard	cytosol	64.49	64.21
AT5G47910.1	Thale cress	cytosol, peroxisome, plasma membrane	63.94	63.74
KRH63901	Soybean	cytosol, nucleus, plasma membrane	64.38	63.69
AT5G51060.1	Thale cress	cytosol	62.42	63.31
VIT_01s0150g00450.t01	Wine grape	cytosol	63.4	63.06
KRH54051	Soybean	cytosol, nucleus, plasma membrane	64.27	62.7
Bra029194.1-P	Field mustard	cytosol	62.09	62.64
Zm00001d007426_P001	Maize	cytosol, plastid	67.32	62.11
TraesCS4D01G352200.3	Wheat	cytosol	56.86	61.63
KRH41026	Soybean	mitochondrion	59.37	61.37
VIT_19s0014g02830.t01	Wine grape	cytosol	56.1	61.31
KRH59706	Soybean	cytosol	59.15	60.47
TraesCS5D01G105900.1	Wheat	cytosol	55.99	59.42
TraesCS3D01G187300.2	Wheat	cytosol	58.06	59.22
AT4G25090.1	Thale cress	cytosol	54.47	58.89
AT5G07390.1	Thale cress	cytosol	57.63	58.65
TraesCS1D01G285000.1	Wheat	cytosol	57.73	58.37
Bra019191.1-P	Field mustard	cytosol, nucleus, plasma membrane	52.29	57.62
Bra009266.1-P	Field mustard	cytosol	56.32	57.32
Bra019189.1-P	Field mustard	cytosol, nucleus, plasma membrane	50.0	55.1
TraesCS3D01G279900.1	Wheat	mitochondrion	54.25	52.64
TraesCS1D01G284900.1	Wheat	cytosol	66.12	52.33
TraesCS1D01G289300.2	Wheat	mitochondrion	45.42	52.12
TraesCS1D01G350600.1	Wheat	mitochondrion	54.58	51.76
TraesCS3D01G347900.2	Wheat	cytosol	46.84	50.77
Bra011911.1-P	Field mustard	cytosol	34.42	49.07
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	49.02	47.37
TraesCS5D01G222100.1	Wheat	mitochondrion	50.76	46.88
TraesCS1D01G283600.1	Wheat	cytosol, peroxisome, plasma membrane	34.86	39.51
Bra013862.1-P	Field mustard	cytosol	10.78	38.22
CDY22645	Canola	cytosol	9.37	38.05
VIT_03s0063g00950.t01	Wine grape	extracellular, vacuole	8.71	37.56
TraesCS2D01G393700.1	Wheat	plasma membrane	13.94	17.73
TraesCS2D01G311100.1	Wheat	plasma membrane	13.62	16.73

Protein Annotations

Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6
GO:GO:0003674	GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SMART:SM00054	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380
TMHMM:TMhelix	EnsemblPlantsGene:TraesCS4D01G324800	EnsemblPlants:TraesCS4D01G324800.1	TIGR:cd00051	TIGR:cd06186	SEG:seg

Description

No Description!

Coordinates

chr4D:-:485382149..485389072

Molecular Weight (calculated)

103544.0 Da

IEP (calculated)

9.585

GRAVY (calculated)

-0.286

Length

918 amino acids

Sequence
(BLAST)

001: MHNRAGGGGG GAGEIVEAGE RIVPHSGPLG AKRSAMRKSA RFAESVSAPL TAPHGAPAPP RARSDDNDDD DYVEITLDVR DDSVAVHSVK PAAGGEDSDV
101: KLLAQTLEKR SSSYGQGVLR TASTRIKQVS QELRRLASVN RRGAGPGRVD KSKSAAAHAL KGLKFISRTD GSAGWPAVEK RFDDLAENGL LHRSKFGKCI
201: GMKELAFAGE LFDALARRRN ITGDSISKAE LLEFWDQISD TSFDSRLQTF FDMVDKDADG RITEEEVKEI ITLSAAANNL KKVSEQSEEY ARLIMEELDP
301: NNLGYIELYN LEMLLLQAPS QSMGIGTTNS RNLSQMLSQH LRPTAEPNPL RRWYRRASYF LEDNWRRCWV ILLWLSICVG LFTWKFMQYR ERAVFKVMGY
401: CVCVAKGGAE TLKFNMALIL LPVCRNTITW FRNRTAAGRF VPFDDNINFH KVIAAGISVG AGLHIISHLT CDFPRLLHAT EEEYEPMKRF FGDDQPPNYW
501: WFVKGTEGWT GLVMLVLMAI AFTLAMPWFR RGRLSLPKPL NRLTGFNAFW YSHHLFVIVY ALLIVHGHFL YLTKKWQKKS TWMYLAVPMV MYACERLTRA
601: LRSSVRPVKI LKVAVYPGNV LSLHFSKPQG FRYKSGQYIF VNCAAVSPFQ WHPFSITSAP QDDYVSVHIR TLGDWTRELK NVFSKVCRPP TEGKSGLLRA
701: EYDRDVGAMS NPSFPKVLID GPYGAPAQDY KQYDIVLLVG LGIGATPMIS IIKDIINNMK RLEGDVESGN PGDASTSASF RTRRAYFYWV TREQGSFEWF
801: RGVMDEIAES DKKSVIELHN YCTSVYEDGD ARSALIAMLQ SLNHAKNGVD IVSGTRVKTH FARPNWRNVY KRIALNHREQ RVGVFYCGAP VLTKELRDLA
901: QDFSRKTNTK FEFHKENF

Best Arabidopsis Sequence Match ( AT5G47910.1 )
(BLAST)

001: MKMRRGNSSN DHELGILRGA NSDTNSDTES IASDRGAFSG PLGRPKRASK KNARFADDLP KRSNSVAGGR GDDDEYVEIT LDIRDDSVAV HSVQQAAGGG
101: GHLEDPELAL LTKKTLESSL NNTTSLSFFR STSSRIKNAS RELRRVFSRR PSPAVRRFDR TSSAAIHALK GLKFIATKTA AWPAVDQRFD KLSADSNGLL
201: LSAKFWECLG MNKESKDFAD QLFRALARRN NVSGDAITKE QLRIFWEQIS DESFDAKLQV FFDMVDKDED GRVTEEEVAE IISLSASANK LSNIQKQAKE
301: YAALIMEELD PDNAGFIMIE NLEMLLLQAP NQSVRMGDSR ILSQMLSQKL RPAKESNPLV RWSEKIKYFI LDNWQRLWIM MLWLGICGGL FTYKFIQYKN
401: KAAYGVMGYC VCVAKGGAET LKFNMALILL PVCRNTITWL RNKTKLGTVV PFDDSLNFHK VIASGIVVGV LLHAGAHLTC DFPRLIAADE DTYEPMEKYF
501: GDQPTSYWWF VKGVEGWTGI VMVVLMAIAF TLATPWFRRN KLNLPNFLKK LTGFNAFWYT HHLFIIVYAL LIVHGIKLYL TKIWYQKTTW MYLAVPILLY
601: ASERLLRAFR SSIKPVKMIK VAVYPGNVLS LHMTKPQGFK YKSGQFMLVN CRAVSPFEWH PFSITSAPGD DYLSVHIRTL GDWTRKLRTV FSEVCKPPTA
701: GKSGLLRADG GDGNLPFPKV LIDGPYGAPA QDYKKYDVVL LVGLGIGATP MISILKDIIN NMKGPDRDSD IENNNSNNNS KGFKTRKAYF YWVTREQGSF
801: EWFKGIMDEI SELDEEGIIE LHNYCTSVYE EGDARVALIA MLQSLQHAKN GVDVVSGTRV KSHFAKPNWR QVYKKIAVQH PGKRIGVFYC GMPGMIKELK
901: NLALDFSRKT TTKFDFHKEN F

Arabidopsis Description

RBOHDRespiratory burst oxidase homolog protein D [Source:UniProtKB/Swiss-Prot;Acc:Q9FIJ0]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.