Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G354200.2 | Wheat | cytosol | 99.29 | 98.82 |
| TraesCS3B01G386600.1 | Wheat | cytosol | 98.94 | 98.59 |
| HORVU3Hr1G087210.4 | Barley | peroxisome, plastid | 97.05 | 94.92 |
| Os01t0835500-01 | Rice | cytosol | 88.55 | 88.97 |
| OQU87817 | Sorghum | cytosol | 88.08 | 87.35 |
| Zm00001d042961_P002 | Maize | plasma membrane | 87.6 | 84.03 |
| TraesCS1D01G289300.2 | Wheat | mitochondrion | 70.25 | 74.38 |
| GSMUA_AchrUn_... | Banana | cytosol | 19.95 | 74.12 |
| GSMUA_AchrUn_... | Banana | cytosol | 36.48 | 70.55 |
| PGSC0003DMT400040179 | Potato | cytosol | 57.62 | 62.89 |
| Solyc06g075570.1.1 | Tomato | cytosol | 60.68 | 61.93 |
| PGSC0003DMT400078138 | Potato | cytosol, nucleus, plastid | 60.57 | 61.51 |
| VIT_06s0004g03790.t01 | Wine grape | nucleus | 61.87 | 61.5 |
| CDX86059 | Canola | peroxisome, plasma membrane, plastid | 27.63 | 59.85 |
| Solyc11g072800.1.1 | Tomato | cytosol | 57.62 | 59.8 |
| KRH49079 | Soybean | cytosol | 59.15 | 58.32 |
| CDY09233 | Canola | cytosol | 57.38 | 54.98 |
| Bra020270.1-P | Field mustard | cytosol | 57.38 | 54.98 |
| AT5G60010.1 | Thale cress | cytosol | 57.38 | 54.85 |
| Bra038274.1-P | Field mustard | cytosol | 54.78 | 53.09 |
| AT3G45810.1 | Thale cress | cytosol | 56.55 | 52.52 |
| TraesCS4D01G352200.3 | Wheat | cytosol | 48.29 | 48.29 |
| TraesCS3D01G279900.1 | Wheat | mitochondrion | 52.66 | 47.15 |
| CDX99140 | Canola | cytosol, peroxisome, plasma membrane | 46.87 | 47.04 |
| TraesCS4D01G324800.1 | Wheat | cytosol | 50.77 | 46.84 |
| TraesCS5D01G105900.1 | Wheat | cytosol | 47.82 | 46.82 |
| TraesCS5D01G306400.1 | Wheat | cytosol | 49.59 | 45.8 |
| TraesCS3D01G187300.2 | Wheat | cytosol | 48.64 | 45.78 |
| TraesCS1D01G350600.1 | Wheat | mitochondrion | 52.07 | 45.56 |
| TraesCS6D01G164500.1 | Wheat | mitochondrion, plasma membrane | 50.06 | 44.63 |
| TraesCS5D01G222100.1 | Wheat | mitochondrion | 51.12 | 43.56 |
| TraesCS1D01G283600.1 | Wheat | cytosol, peroxisome, plasma membrane | 38.13 | 39.88 |
| TraesCS1D01G284800.1 | Wheat | plastid | 45.93 | 38.94 |
| TraesCS1D01G285000.1 | Wheat | cytosol | 41.32 | 38.55 |
| TraesCS1D01G284900.1 | Wheat | cytosol | 43.92 | 32.07 |
| TraesCS2D01G393700.1 | Wheat | plasma membrane | 15.35 | 18.01 |
| TraesCS2D01G311100.1 | Wheat | plasma membrane | 14.76 | 16.73 |
Protein Annotations
| Gene3D:1.10.238.10 | MapMan:10.1.1 | Gene3D:2.40.30.10 | Gene3D:3.40.50.80 | ncoils:Coil | InterPro:Cyt_b245_heavy_chain |
| InterPro:EF-hand-dom_pair | InterPro:EF_Hand_1_Ca_BS | InterPro:EF_hand_dom | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom |
| InterPro:Fe_red_NAD-bd_6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004601 | GO:GO:0005488 | GO:GO:0005509 |
| GO:GO:0005575 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016491 | GO:GO:0050664 |
| GO:GO:0055114 | InterPro:IPR002048 | InterPro:IPR017927 | InterPro:NADPH_Ox | PFAM:PF01794 | PFAM:PF08022 |
| PFAM:PF08030 | PFAM:PF08414 | PRINTS:PR00466 | ScanProsite:PS00018 | PFscan:PS50222 | PFscan:PS51384 |
| PANTHER:PTHR11972 | PANTHER:PTHR11972:SF68 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF47473 | SUPFAM:SSF52343 | SUPFAM:SSF63380 |
| TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3D01G347900 | EnsemblPlants:TraesCS3D01G347900.2 | TIGR:cd06186 | SEG:seg | : |
Description
No Description!
Coordinates
chr3D:+:459463315..459467601
Molecular Weight (calculated)
95320.7 Da
IEP (calculated)
9.854
GRAVY (calculated)
-0.159
Length
847 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPGGGYAD RPAPPLDGIT VEGGGGRPAG LPRPPGFRGL MQQPSRLASG VRQFASRVSM KVPEVVPGIR PGGGRMTRMQ SSAQMGLKGL RFLDKTSGSK
101: EGWKAVERRF DEMSKASGRL PKESFGKCIG MGDSKEFAGE LFVTLSRRRS IEPEQGITKE QLREFWTEMT DQNFDSRLRI FFDMCDKNGD GMLTEDEVKE
201: VIILSASANK LAKLKSHAAT YSSLIMEELD PDDRGYIEIW QLETLLRGMV SAQAPEVKLK RTTSSLARTM IPMRYRSPLK RHVTRTMDFA HENWKRIWLV
301: TLWLAANLAL FVYKFEQYKR RSSFQVMGNC VCVAKGAAET LKLNMALILL PVCRNTLTTL RSTALSHVIP FDDNINFHKV LAGAIAVGTV VHTLAHVTCD
401: FPRLVSCPSD KFMALLGPNF GFRQPTYPDL LASAPGVTGI LMIIIMTFSF TLAMHTFRRS VVKLPSPLHH LAGFNAFWYA HHLLLLVYVL LVVHSYFIFL
501: TRIWYKKTTW MFLIVPVLFY ACERIIRKVR ENNYHVNILK AAIYPGNVLS LHMKKPPGFK YKSGMYLFVK CPDVSPFEWH PFSITSAPGD DYLSVHIRTL
601: GDWTSELRNL FGKCCEAQVT SKKATLSRLE TTVVADSATE DTRFPKVFID GPYGAPAQNY KKYDILLLIG LGIGATPFIS ILKDLLNNIK SNDEVESMHG
701: SEIGSFKNSG PGRAYFYWVT REQGSFDWFK GVMNEVADND HSDVIEMHNY LTSVYEEGDA RSALIAMVQS LQHAKNGVDI VSGSKIRTHF ARPNWRKVFS
801: DLANAHKNSR IGVFYCGSPT LTKQLKDLSK EFSQTTTTRF HFHKENF
101: EGWKAVERRF DEMSKASGRL PKESFGKCIG MGDSKEFAGE LFVTLSRRRS IEPEQGITKE QLREFWTEMT DQNFDSRLRI FFDMCDKNGD GMLTEDEVKE
201: VIILSASANK LAKLKSHAAT YSSLIMEELD PDDRGYIEIW QLETLLRGMV SAQAPEVKLK RTTSSLARTM IPMRYRSPLK RHVTRTMDFA HENWKRIWLV
301: TLWLAANLAL FVYKFEQYKR RSSFQVMGNC VCVAKGAAET LKLNMALILL PVCRNTLTTL RSTALSHVIP FDDNINFHKV LAGAIAVGTV VHTLAHVTCD
401: FPRLVSCPSD KFMALLGPNF GFRQPTYPDL LASAPGVTGI LMIIIMTFSF TLAMHTFRRS VVKLPSPLHH LAGFNAFWYA HHLLLLVYVL LVVHSYFIFL
501: TRIWYKKTTW MFLIVPVLFY ACERIIRKVR ENNYHVNILK AAIYPGNVLS LHMKKPPGFK YKSGMYLFVK CPDVSPFEWH PFSITSAPGD DYLSVHIRTL
601: GDWTSELRNL FGKCCEAQVT SKKATLSRLE TTVVADSATE DTRFPKVFID GPYGAPAQNY KKYDILLLIG LGIGATPFIS ILKDLLNNIK SNDEVESMHG
701: SEIGSFKNSG PGRAYFYWVT REQGSFDWFK GVMNEVADND HSDVIEMHNY LTSVYEEGDA RSALIAMVQS LQHAKNGVDI VSGSKIRTHF ARPNWRKVFS
801: DLANAHKNSR IGVFYCGSPT LTKQLKDLSK EFSQTTTTRF HFHKENF
001: MKSNTPTEDS TKWMLESVEI DSMGESSSKE PEINLNKNEG GLKKNASRNL GVGSIIRTLS VSNWRKSGNL GSPSTRKSGN LGPPTNAVPK KTGPQRVERT
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF
101: TSSAARGLQS LRFLDRTVTG RERDAWRSIE NRFNQFSVDG KLPKEKFGVC IGMGDTMEFA AEVYEALGRR RQIETENGID KEQLKLFWED MIKKDLDCRL
201: QIFFDMCDKN GDGKLTEEEV KEVIVLSASA NRLGNLKKNA AAYASLIMEE LDPDHKGYIE MWQLEILLTG MVTNADTEKM KKSQTLTRAM IPERYRTPMS
301: KYVSVTAELM HENWKKLWVL ALWAIINVYL FMWKYEEFMR NPLYNITGRC VCAAKGAAET LKLNMALILV PVCRKTLTIL RSTFLNRVVP FDDNINFHKV
401: IAYMIAFQAL LHTALHIFCN YPRLSSCSYD VFLTYAGAAL GNTQPSYLGL MLTSVSITGV LMIFFMGFSF TLAMHYFRRN IVKLPKPFNV LAGFNAFWYA
501: HHLLVLAYIL LIIHGYYLII EKPWYQKTTW MYLAVPMLFY ASERLFSRLL QEHSHRVNVI KAIVYSGNVL ALYVTKPPGF KYKSGMYMFV KCPDLSKFEW
601: HPFSITSAPG DDYLSVHIRA LGDWTTELRS RFAKTCEPTQ AAAKPKPNSL MRMETRAAGV NPHIEESQVL FPKIFIKGPY GAPAQNYQKF DILLLVGLGI
701: GATPFISILK DMLNHLKPGI PRSGQKYEGS VGGESIGGDS VSGGGGKKFP QRAYFFWVTR EQASFDWFKG VMDDIAEYDK THVIEMHNYL TSMYEAGDAR
801: SALIAMVQKL QHAKNGVDIV SESRIRTHFA RPNWRKVFSE LSSKHEACRI GVFYCGSPTL VRPLKELCQE FSLESSTRFT FHKENF
Arabidopsis Description
RBOHHPutative respiratory burst oxidase homolog protein H [Source:UniProtKB/Swiss-Prot;Acc:Q9FJD6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.