Factsheet for Solyc05g025690.1.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 4
nucleus 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d020609_P001	Maize	mitochondrion	44.21	15.09
VIT_11s0016g00540.t01	Wine grape	cytosol, peroxisome, plastid	52.48	13.85
KRH37549	Soybean	cytosol	48.76	12.72
KRH12608	Soybean	cytosol	48.76	12.61
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	47.52	12.31
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	47.11	12.21
AT1G19230.2	Thale cress	cytosol, peroxisome, plasma membrane	47.11	11.97
Solyc07g042460.1.1	Tomato	cytosol	43.39	11.92
Bra031070.1-P	Field mustard	cytosol, peroxisome, plasma membrane, plastid	46.69	11.77
GSMUA_Achr3P05840_001	Banana	mitochondrion	42.56	11.57
CDY41031	Canola	cytosol, peroxisome, plasma membrane	47.52	11.31
TraesCS6A01G180600.1	Wheat	mitochondrion	44.21	11.19
Os08t0453700-00	Rice	plastid	43.8	11.16
TraesCS6B01G205000.1	Wheat	mitochondrion	43.8	11.08
Zm00001d032079_P001	Maize	mitochondrion	44.63	11.07
TraesCS6D01G164500.1	Wheat	mitochondrion, plasma membrane	43.39	11.05
GSMUA_Achr8P23680_001	Banana	mitochondrion	40.5	11.0
HORVU6Hr1G035970.2	Barley	mitochondrion	43.39	10.95
Bra025721.1-P	Field mustard	cytosol, nucleus, peroxisome	46.28	10.82
KXG25273	Sorghum	mitochondrion	45.04	10.81
TraesCS5B01G212100.1	Wheat	mitochondrion	43.39	10.66
Os09t0438000-01	Rice	mitochondrion	44.21	10.63
TraesCS5A01G211800.1	Wheat	cytosol, mitochondrion, peroxisome, plasma membrane	43.39	10.62
TraesCS5D01G222100.1	Wheat	mitochondrion	43.39	10.56
HORVU5Hr1G062490.8	Barley	plasma membrane	42.98	10.54
KXG35704	Sorghum	mitochondrion	43.8	10.53
CDY26689	Canola	cytosol, peroxisome, plasma membrane	41.32	9.83
Solyc01g099620.2.1	Tomato	cytosol	34.3	9.6
Solyc03g117980.2.1	Tomato	nucleus	35.95	9.28
Solyc06g075570.1.1	Tomato	cytosol	30.17	8.8
Solyc08g081690.2.1	Tomato	cytosol	34.71	8.72
Solyc06g068680.2.1	Tomato	cytosol	30.17	8.52
Solyc11g072800.1.1	Tomato	cytosol	24.38	7.23
Solyc01g094900.1.1	Tomato	cytosol, mitochondrion, plasma membrane, plastid	2.48	3.08
Solyc03g112320.2.1	Tomato	plasma membrane	4.55	1.98
Solyc01g102610.2.1	Tomato	plastid	5.37	1.76
Solyc01g094890.2.1	Tomato	plasma membrane	4.55	1.54
Solyc01g094910.2.1	Tomato	peroxisome, plasma membrane, plastid	4.55	1.53
Solyc05g025680.1.1	Tomato	plasma membrane	1.24	0.48
PGSC0003DMT400066027	Potato	peroxisome	0.41	0.22
Solyc06g036220.1.1	Tomato	plasma membrane	0.0	0.0

Protein Annotations

Gene3D:1.10.238.10	MapMan:35.1	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS	InterPro:EF_hand_dom	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0050664	GO:GO:0055114	GO:GO:0098869	InterPro:IPR002048	UniProt:K4BZV7
InterPro:NADPH_Ox	PFAM:PF08414	PFAM:PF13202	ScanProsite:PS00018	PFscan:PS50222	PANTHER:PTHR11972
PANTHER:PTHR11972:SF44	SUPFAM:SSF47473	EnsemblPlantsGene:Solyc05g025690.1	EnsemblPlants:Solyc05g025690.1.1	UniParc:UPI0002765CD5	:

Description

No Description!

Coordinates

chr5:-:35773707..35776405

Molecular Weight (calculated)

27939.1 Da

IEP (calculated)

6.929

GRAVY (calculated)

-0.620

Length

242 amino acids

Sequence
(BLAST)

001: MQLMSLFRSS PRSCSNYSRR FDLPEAETSE HVGGAMLPIF FQNNLQNTNN YERDLVEVTL QLDKNSFVLC SVDHKIQIEE ENSPPYWLRS PPEKEMIWKA
101: VRNKSSAERA LGGLRFISKT SGECDSNNND IWGKVESRFN ALAKNGLLRR EDFGECIGMG DSKEFAVGVF DALVRRRRQK MARINKSEFH EFWLQISDQS
201: FHARLEIFFD MADSNGDGKI TKEEVQEVRL SLVQLSQSKQ IR

Best Arabidopsis Sequence Match ( AT1G19230.1 )
(BLAST)

001: MKLSPLSFST SSSFSHADGI DDGVELISSP FAGGAMLPVF LNDLSRNSGE SGSGSSWERE LVEVTLELDV GDDSILVCGM SEAASVDSRA RSVDLVTARL
101: SRNLSNASTR IRQKLGKLLR SESWKTTTSS TAGERDRDLE RQTAVTLGIL TARDKRKEDA KLQRSTSSAQ RALKGLQFIN KTTRGNSCVC DWDCDCDQMW
201: KKVEKRFESL SKNGLLARDD FGECVGMVDS KDFAVSVFDA LARRRRQKLE KITKDELHDF WLQISDQSFD ARLQIFFDMA DSNEDGKITR EEIKELLMLS
301: ASANKLAKLK EQAEEYASLI MEELDPENFG YIELWQLETL LLQRDAYMNY SRPLSTTSGG VNNWQRSWVL LVWVMLMAIL FVWKFLEYRE KAAFKVMGYC
401: LTTAKGAAET LKLNMALVLL PVCRNTLTWL RSTRARACVP FDDNINFHKI IACAIAIGIL VHAGTHLACD FPRIINSSPE QFVLIASAFN GTKPTFKDLM
501: TGAEGITGIS MVILTTIAFT LASTHFRRNR VRLPAPLDRL TGFNAFWYTH HLLVVVYIML IVHGTFLFFA DKWYQKTTWM YISVPLVLYV AERSLRACRS
601: KHYSVKILKV SMLPGEVLSL IMSKPPGFKY KSGQYIFLQC PTISRFEWHP FSITSAPGDD QLSVHIRTLG DWTEELRRVL TVGKDLSTCV IGRSKFSAYC
701: NIDMINRPKL LVDGPYGAPA QDYRSYDVLL LIGLGIGATP FISILKDLLN NSRDEQTDNE FSRSDFSWNS CTSSYTTATP TSTHGGKKKA VKAHFYWVTR
801: EPGSVEWFRG VMEEISDMDC RGQIELHNYL TSVYDEGDAR STLIKMVQAL NHAKHGVDIL SGTRVRTHFA RPNWKEVFSS IARKHPNSTV GVFYCGIQTV
901: AKELKKQAQD MSQKTTTRFE FHKEHF

Arabidopsis Description

RBOHERespiratory burst oxidase homolog protein E [Source:UniProtKB/Swiss-Prot;Acc:O81211]
SUBAcon: [peroxisome,cytosol,plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.