CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX81047	Canola	cytosol	78.53	78.99
CDX78290	Canola	cytosol	76.08	76.35
CDX70035	Canola	cytosol	71.76	69.41
CDX98976	Canola	cytosol	71.65	67.62
CDY65632	Canola	nucleus, peroxisome	10.27	61.11
CDY22644	Canola	plasma membrane	39.32	58.51
CDX92671	Canola	cytosol	50.64	57.41
CDY32647	Canola	cytosol, peroxisome, plasma membrane	59.63	56.15
CDY38845	Canola	cytosol, peroxisome, plasma membrane	59.63	56.15
CDY35764	Canola	cytosol, nucleus, plasma membrane	57.88	55.17
VIT_19s0014g02830.t01	Wine grape	cytosol	53.44	54.52
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	58.46	54.4
KRH63901	Soybean	cytosol, nucleus, plasma membrane	58.81	54.31
CDY11053	Canola	cytosol, nucleus, plasma membrane	52.39	53.9
CDX86335	Canola	cytosol, nucleus, plasma membrane	57.76	53.69
CDX85316	Canola	cytosol, nucleus, plasma membrane	57.76	53.69
KRH54051	Soybean	cytosol, nucleus, plasma membrane	58.81	53.56
KRH41026	Soybean	mitochondrion	55.43	53.49
CDX92674	Canola	mitochondrion	21.47	52.87
KRH59706	Soybean	cytosol	55.19	52.67
CDX92675	Canola	cytosol	23.34	51.81
CDY11054	Canola	cytosol, nucleus, plasma membrane	48.89	51.35
CDY06348	Canola	cytosol	48.77	51.23
CDY26109	Canola	mitochondrion	35.24	51.19
CDY08237	Canola	cytosol, peroxisome, plasma membrane	31.04	50.0
CDX86059	Canola	peroxisome, plasma membrane, plastid	20.3	44.5
CDY08347	Canola	mitochondrion	49.01	44.49
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	46.32	42.51
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	46.21	42.4
CDY38202	Canola	mitochondrion	46.56	42.31
CDY63433	Canola	cytosol	46.09	41.71
CDY25278	Canola	cytosol, peroxisome, plasma membrane	45.39	41.69
CDY09233	Canola	cytosol	41.07	39.82
CDY41031	Canola	cytosol, peroxisome, plasma membrane	46.32	39.04
CDY34341	Canola	nucleus	11.79	39.0
CDY26689	Canola	cytosol, peroxisome, plasma membrane	44.92	37.86
CDX99140	Canola	cytosol, peroxisome, plasma membrane	35.01	35.55
CDY70539	Canola	nucleus	12.14	33.99
CDY22645	Canola	cytosol	7.7	29.2
CDX86058	Canola	cytosol	11.67	28.9
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	3.03	20.47
CDX88061	Canola	plasma membrane	14.24	18.43
CDY44266	Canola	plasma membrane, vacuole	14.47	17.77
CDY46972	Canola	plasma membrane, vacuole	14.24	17.48
CDY38013	Canola	golgi, plasma membrane	10.04	17.44
CDY07230	Canola	plasma membrane	14.35	17.32
CDY69826	Canola	cytosol, plastid, vacuole	7.12	17.09
CDY38014	Canola	plasma membrane	13.77	16.74
CDX90043	Canola	golgi, plasma membrane	11.2	16.52
CDY22585	Canola	plasma membrane	13.77	16.28
CDY12264	Canola	plasma membrane	13.19	16.01
CDX71600	Canola	plasma membrane	13.65	15.79
CDY65711	Canola	plasma membrane	13.54	15.68
CDY68445	Canola	plastid	8.17	13.26
CDY38012	Canola	plasma membrane	3.85	10.89

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078CYK5
EnsemblPlants:CDX81049	ProteinID:CDX81049	ProteinID:CDX81049.1	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair	InterPro:EF_Hand_1_Ca_BS
InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00134486001
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PRINTS:PR00466	ScanProsite:PS00018	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF64	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix
UniParc:UPI0004EE40DC	SEG:seg	:	:	:	:

Description

BnaC03g03030D

Coordinates

chrLK031823:-:1476696..1480728

Molecular Weight (calculated)

97258.3 Da

IEP (calculated)

8.793

GRAVY (calculated)

-0.211

Length

857 amino acids

Sequence
(BLAST)

001: MQTVGFENAT RYRGQSSARA SEEGHQENVE ITLDIKEDSI SVYNSKPSKD EDPGKSRLGQ SRSMKKISVL KHLESVSNEL RRLTSSVPLT SETKPPRRAE
101: LALKGLKFIT KADGVAGWPG VEKEFARLTE KTGGLLPRSN FGECIGIKSK GFAEALFDAL AKRRNITGEV ISQDQLQEFW EQINDQDFDS RLRLFFDMAD
201: TDADGRLTEN EVQKIITLSA SANNLDKITD QAAEYAALIM EELDPDDCGY IMIEALEVLL LQGPAEAIRD GMSKELSMLI SQQLEVSQSR NLGKRFYSGV
301: KYFVLDNWKR LWVMALWIAV MAGLFTWKFM EYRKRPAYQV MGACVCIAKG AGETLKLNMA IVLLPVCRNT ITLLRTKTKL SVAVPFDDNL NFHKVIAIAI
401: SIGVGIHATA HLACDFPRLI AADEETYKPM EQYFGVQPKS YVEFLKSVEV VTGTVMVILM TISFTLATSW LRRNNSETLP KPLKKIIGFN AFWYTHHLFV
501: IVYTLLVIHG YYVYLIKLWY KKTTWMYLMV PVVIYLSERL VRALRSRIET VKILKVGLLP GKLLSLHMSR PDNFRYKSGQ YIYLKCSEVS SLEWHPFSIT
601: SAPGDDYLSV HIRGLGDWTN KLRSKFSEVC AAPTDENRLN SGDLRNGNSY PYWPKLVIDG PYGAPSQDYK NFEVVLLVGL GIGATPMISI IKDIINNLKV
701: NTGDEEEGRG SNRNHNVMFI TKRAYFHWST KEQGTFDWFK NVLDEVAEAD VNNVIELHNY CSSIYQEEDA RSALITMLQS LYHAKNGRDI VSGTRVMSEF
801: ARPKWRSIYK RIAVKHPYTR VGVFYCGLAG AVKEHQDLAK EFSHKTSTKF CFHKENF

Best Arabidopsis Sequence Match ( AT5G07390.1 )
(BLAST)

001: MMNRSEMQKL GFEHVRYYTE SPYNRGESSA NVATTSNYYG EDEPYVEITL DIHDDSVSVY GLKSPNHRGA GSNYEDQSLL RQGRSGRSNS VLKRLASSVS
101: TGITRVASSV SSSSARKPPR PQLAKLRRSK SRAELALKGL KFITKTDGVT GWPEVEKRFY VMTMTTNGLL HRSRFGECIG MKSTEFALAL FDALARRENV
201: SGDSININEL KEFWKQITDQ DFDSRLRTFF AMVDKDSDGR LNEAEVREII TLSASANELD NIRRQADEYA ALIMEELDPY HYGYIMIENL EILLLQAPMQ
301: DVRDGEGKKL SKMLSQNLMV PQSRNLGARF CRGMKYFLFD NWKRVWVMAL WIGAMAGLFT WKFMEYRKRS AYEVMGVCVC IAKGAAETLK LNMAMILLPV
401: CRNTITWLRT KTKLSAIVPF DDSLNFHKVI AIGISVGVGI HATSHLACDF PRLIAADEDQ YEPMEKYFGP QTKRYLDFVQ SVEGVTGIGM VVLMTIAFTL
501: ATTWFRRNKL NLPGPLKKIT GFNAFWYSHH LFVIVYSLLV VHGFYVYLII EPWYKKTTWM YLMVPVVLYL CERLIRAFRS SVEAVSVLKV AVLPGNVLSL
601: HLSRPSNFRY KSGQYMYLNC SAVSTLEWHP FSITSAPGDD YLSVHIRVLG DWTKQLRSLF SEVCKPRPPD EHRLNRADSK HWDYIPDFPR ILIDGPYGAP
701: AQDYKKFEVV LLVGLGIGAT PMISIVSDII NNLKGVEEGS NRRQSPIHNM VTPPVSPSRK SETFRTKRAY FYWVTREQGS FDWFKNVMDE VTETDRKNVI
801: ELHNYCTSVY EEGDARSALI TMLQSLNHAK HGVDVVSGTR VMSHFARPNW RSVFKRIAVN HPKTRVGVFY CGAAGLVKEL RHLSLDFSHK TSTKFIFHKE
901: NF

Arabidopsis Description

RBOHARespiratory burst oxidase homolog protein A [Source:UniProtKB/Swiss-Prot;Acc:O81209]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.