Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 3
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY46972 | Canola | plasma membrane, vacuole | 91.99 | 87.25 |
| CDY44266 | Canola | plasma membrane, vacuole | 91.54 | 86.82 |
| AT5G23980.1 | Thale cress | plasma membrane | 90.63 | 85.84 |
| Bra009719.1-P | Field mustard | golgi, plasma membrane | 63.9 | 85.45 |
| AT5G23990.2 | Thale cress | endoplasmic reticulum, plasma membrane | 89.88 | 85.12 |
| CDY68445 | Canola | plastid | 54.38 | 68.18 |
| CDX68510 | Canola | extracellular, mitochondrion, plasma membrane, plastid | 12.24 | 63.78 |
| KRH35246 | Soybean | plasma membrane | 56.8 | 53.56 |
| GSMUA_Achr8P12260_001 | Banana | peroxisome | 40.33 | 53.4 |
| PGSC0003DMT400026254 | Potato | plasma membrane | 55.89 | 52.48 |
| PGSC0003DMT400024558 | Potato | plasma membrane, vacuole | 55.44 | 51.91 |
| CDY69826 | Canola | cytosol, plastid, vacuole | 27.64 | 51.26 |
| CDY38013 | Canola | golgi, plasma membrane | 37.61 | 50.51 |
| GSMUA_Achr8P12300_001 | Banana | extracellular, peroxisome, plastid | 17.22 | 50.0 |
| GSMUA_Achr8P12250_001 | Banana | plasma membrane | 51.36 | 48.02 |
| CDX90043 | Canola | golgi, plasma membrane | 40.79 | 46.47 |
| CDY07230 | Canola | plasma membrane | 48.94 | 45.63 |
| Os04t0578600-01 | Rice | golgi, mitochondrion, vacuole | 29.46 | 43.43 |
| CDY38014 | Canola | plasma membrane | 46.07 | 43.26 |
| HORVU2Hr1G094150.3 | Barley | golgi, plasma membrane | 17.52 | 41.58 |
| TraesCS2D01G393700.1 | Wheat | plasma membrane | 45.17 | 41.41 |
| TraesCS2B01G414300.1 | Wheat | plasma membrane | 44.86 | 41.08 |
| TraesCS2A01G396000.1 | Wheat | plasma membrane | 45.62 | 38.92 |
| GSMUA_Achr8P12270_001 | Banana | plasma membrane | 48.64 | 35.38 |
| VIT_16s0050g00990.t01 | Wine grape | plastid | 59.21 | 33.28 |
| CDY38012 | Canola | plasma membrane | 13.29 | 29.04 |
| CDY22585 | Canola | plasma membrane | 30.06 | 27.45 |
| CDY65711 | Canola | plasma membrane | 30.51 | 27.3 |
| CDX71600 | Canola | plasma membrane | 30.51 | 27.26 |
| CDY12264 | Canola | plasma membrane | 28.55 | 26.77 |
| CDY65632 | Canola | nucleus, peroxisome | 4.68 | 21.53 |
| CDX92674 | Canola | mitochondrion | 11.18 | 21.26 |
| CDX86059 | Canola | peroxisome, plasma membrane, plastid | 11.78 | 19.95 |
| CDY22644 | Canola | plasma membrane | 16.77 | 19.27 |
| CDX92671 | Canola | cytosol | 18.88 | 16.53 |
| CDY11053 | Canola | cytosol, nucleus, plasma membrane | 18.88 | 15.01 |
| CDX78290 | Canola | cytosol | 19.03 | 14.75 |
| CDX81047 | Canola | cytosol | 18.88 | 14.67 |
| CDY08347 | Canola | mitochondrion | 20.54 | 14.41 |
| CDX81920 | Canola | cytosol, nucleus, plasma membrane, plastid | 20.24 | 14.35 |
| CDY21676 | Canola | cytosol, peroxisome, plasma membrane, plastid | 20.24 | 14.35 |
| CDY06348 | Canola | cytosol | 17.67 | 14.34 |
| CDY08237 | Canola | cytosol, peroxisome, plasma membrane | 11.48 | 14.29 |
| CDY35764 | Canola | cytosol, nucleus, plasma membrane | 19.34 | 14.24 |
| CDX81049 | Canola | cytosol | 18.43 | 14.24 |
| CDX85316 | Canola | cytosol, nucleus, plasma membrane | 19.79 | 14.21 |
| CDX86335 | Canola | cytosol, nucleus, plasma membrane | 19.79 | 14.21 |
| CDY38202 | Canola | mitochondrion | 19.94 | 14.0 |
| CDY45918 | Canola | cytosol, nucleus, plasma membrane, plastid | 19.34 | 13.9 |
| CDY11054 | Canola | cytosol, nucleus, plasma membrane | 16.92 | 13.73 |
| CDX70035 | Canola | cytosol | 18.13 | 13.54 |
| CDY38845 | Canola | cytosol, peroxisome, plasma membrane | 18.28 | 13.3 |
| CDY32647 | Canola | cytosol, peroxisome, plasma membrane | 18.28 | 13.3 |
| CDY41031 | Canola | cytosol, peroxisome, plasma membrane | 20.24 | 13.18 |
| CDX98976 | Canola | cytosol | 17.98 | 13.11 |
| CDY25278 | Canola | cytosol, peroxisome, plasma membrane | 18.43 | 13.08 |
| CDY26109 | Canola | mitochondrion | 11.63 | 13.05 |
| CDY26689 | Canola | cytosol, peroxisome, plasma membrane | 19.94 | 12.98 |
| CDY09233 | Canola | cytosol | 17.07 | 12.78 |
| CDY63433 | Canola | cytosol | 18.13 | 12.67 |
| CDX99140 | Canola | cytosol, peroxisome, plasma membrane | 15.86 | 12.44 |
| CDX92675 | Canola | cytosol | 4.83 | 8.29 |
| CDX86058 | Canola | cytosol | 3.47 | 6.65 |
| CDY22645 | Canola | cytosol | 1.51 | 4.42 |
| CDY70539 | Canola | nucleus | 1.81 | 3.92 |
| CDY34341 | Canola | nucleus | 1.36 | 3.47 |
Protein Annotations
| Gene3D:2.40.30.10 | MapMan:25.4.2.1 | MapMan:25.5.2.1 | Gene3D:3.40.50.80 | GO:A0A078DFP3 | EnsemblPlants:CDX88061 |
| ProteinID:CDX88061 | ProteinID:CDX88061.1 | InterPro:FAD-bd_8 | InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:GSBRNA2T00147477001 | InterPro:IPR017927 | PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 | PFscan:PS51384 |
| PANTHER:PTHR11972 | PANTHER:PTHR11972:SF62 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 | TMHMM:TMhelix |
| UniParc:UPI0004EEA116 | SEG:seg | : | : | : | : |
Description
BnaA06g26520D
Coordinates
chrLK031854:-:363374..367506
Molecular Weight (calculated)
75932.9 Da
IEP (calculated)
9.566
GRAVY (calculated)
0.167
Length
662 amino acids
Sequence
(BLAST)
(BLAST)
001: MAKYLNTTYF GPQGINLVLL TVPMMFIAVL SSVYLHIQKK PTQTQSKWKI KGRMGRVMMV MNPLGIVTAT EFTFSLLFVA LLAWALANYL YLSYHVSLHN
101: DDNAKIWQAK FRAFGLRIGY VGHYCWAFLL FPVTRASTIL PLVGLTSESS IKYHIWLGHI SNFLFLVHTV VFLIYWAMIN KLMETFAWNP TYVPNLAGTI
201: AMVIGIAMWV TSLPYYRRKK FEIFFYTHHL YGLYVIFYVI HVGDSWLCMI LPNIFLFFID RYLRFLQSTK RSRLVSARIL PSDNLELTFA KTPGLHYTPT
301: SILFLHVPSI SKLQWHPFTI TSSSNLEKDT LSVVIRRQGS WTQKLYTHIS SSIDSLEVST EGPYGPNSLD LRYEHDSLIL VSGGSGITPF ISVIRELIFQ
401: SQNQSTKLPD VLLVCAFKHY HDLAFLDLIF PSDISVSDIS RLNLRIEAYI TQEDKKPETD NNHRLLQKKW FKPHPLDSPI SPVLGPNNLL WLGVVILSSF
501: VMFLLLIAIV TRYYIYPVDH NTGSIYNFSY RGLWDMFLGC VCIFIASSIV FLWRKKQNKE GEKESKKQVQ SVDIQRPTSS PGSWFCGHER ELESVPYQSI
601: VHATSVHFGS KPNLKKILFE AEGSEDVGVM VCGPRKMRHE VARICSSGLA KNLHFEAISF NW
101: DDNAKIWQAK FRAFGLRIGY VGHYCWAFLL FPVTRASTIL PLVGLTSESS IKYHIWLGHI SNFLFLVHTV VFLIYWAMIN KLMETFAWNP TYVPNLAGTI
201: AMVIGIAMWV TSLPYYRRKK FEIFFYTHHL YGLYVIFYVI HVGDSWLCMI LPNIFLFFID RYLRFLQSTK RSRLVSARIL PSDNLELTFA KTPGLHYTPT
301: SILFLHVPSI SKLQWHPFTI TSSSNLEKDT LSVVIRRQGS WTQKLYTHIS SSIDSLEVST EGPYGPNSLD LRYEHDSLIL VSGGSGITPF ISVIRELIFQ
401: SQNQSTKLPD VLLVCAFKHY HDLAFLDLIF PSDISVSDIS RLNLRIEAYI TQEDKKPETD NNHRLLQKKW FKPHPLDSPI SPVLGPNNLL WLGVVILSSF
501: VMFLLLIAIV TRYYIYPVDH NTGSIYNFSY RGLWDMFLGC VCIFIASSIV FLWRKKQNKE GEKESKKQVQ SVDIQRPTSS PGSWFCGHER ELESVPYQSI
601: VHATSVHFGS KPNLKKILFE AEGSEDVGVM VCGPRKMRHE VARICSSGLA KNLHFEAISF NW
001: MGNMRSLVKM LMVVLFLGWI FVWIMISTNR FQNIWTPKLA KYLKTTYFGP QGMNLVLLTV PMMFIAVLSC VYLHTQKQPS QTQREWKVKG RMGRVMMVMN
101: PLGIVTATEL TFSLLFLALL VWALSNYLYL SYHVHLHNHD NAKIWQAKFR AFGLRIGYVG HYCWAFLFFP VTRASTILPL VGLTSESSIK YHIWLGHVSN
201: FCFLVHTVVF LIYWAMVNKL METFAWNATY VPNLAGTIAM VIGIAIWVTS LPSFRRKKFE IFFYTHHLYG LYIVFYAIHV GDSWFCMILP NIFLFFIDRY
301: LRFLQSTKRS RLVSAKILPS DNLELTFAKT SGLHYTPTSI LFLHVPSISK LQWHPFTITS SSNLEKDTLS VVIRKQGSWT QKLYTHLSSS IDSLEVSTEG
401: PYGPNSFDVS RHDSLILVGG GSGVTPFISV IRELIFQSQN RSTKLPNVLL VCAFKNYHDL AFLDLIFPSD ISVSDISKLN LRIEAYITRE DKKPETTDDH
501: KLLQTKWFKP QPLDSPISPV LGPNNFLWLG VVILSSFVMF LLLIGIVTRY YIYPVDHNTG SIYNFTYRVL WVMFLGCVCI FISSSIIFLW RKKENKEGDK
601: DSKKQVQSVE FQTPTSSPGS WFHGHERELE SVPYQSIVQA TSVHFGSKPN LKKILFEAEG SEDVGVMVCG PKKMRHEVAK ICSSGLAKNL HFEAISFNW
101: PLGIVTATEL TFSLLFLALL VWALSNYLYL SYHVHLHNHD NAKIWQAKFR AFGLRIGYVG HYCWAFLFFP VTRASTILPL VGLTSESSIK YHIWLGHVSN
201: FCFLVHTVVF LIYWAMVNKL METFAWNATY VPNLAGTIAM VIGIAIWVTS LPSFRRKKFE IFFYTHHLYG LYIVFYAIHV GDSWFCMILP NIFLFFIDRY
301: LRFLQSTKRS RLVSAKILPS DNLELTFAKT SGLHYTPTSI LFLHVPSISK LQWHPFTITS SSNLEKDTLS VVIRKQGSWT QKLYTHLSSS IDSLEVSTEG
401: PYGPNSFDVS RHDSLILVGG GSGVTPFISV IRELIFQSQN RSTKLPNVLL VCAFKNYHDL AFLDLIFPSD ISVSDISKLN LRIEAYITRE DKKPETTDDH
501: KLLQTKWFKP QPLDSPISPV LGPNNFLWLG VVILSSFVMF LLLIGIVTRY YIYPVDHNTG SIYNFTYRVL WVMFLGCVCI FISSSIIFLW RKKENKEGDK
601: DSKKQVQSVE FQTPTSSPGS WFHGHERELE SVPYQSIVQA TSVHFGSKPN LKKILFEAEG SEDVGVMVCG PKKMRHEVAK ICSSGLAKNL HFEAISFNW
Arabidopsis Description
ATFRO5ferric reduction oxidase 5 [Source:TAIR;Acc:AT5G23990]
SUBAcon: [endoplasmic reticulum,plasma membrane]
SUBAcon: [endoplasmic reticulum,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.