CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX70035	Canola	cytosol	95.81	98.19
AT5G07390.1	Thale cress	cytosol	82.6	83.15
CDX81049	Canola	cytosol	67.62	71.65
CDX81047	Canola	cytosol	64.21	68.43
CDX78290	Canola	cytosol	63.33	67.33
CDY65632	Canola	nucleus, peroxisome	10.46	65.97
CDY22644	Canola	plasma membrane	40.53	63.89
CDY38845	Canola	cytosol, peroxisome, plasma membrane	61.12	60.99
CDY32647	Canola	cytosol, peroxisome, plasma membrane	60.9	60.77
CDX92671	Canola	cytosol	49.45	59.39
CDY35764	Canola	cytosol, nucleus, plasma membrane	58.15	58.73
CDX92674	Canola	mitochondrion	22.25	58.05
KRH41026	Soybean	mitochondrion	56.61	57.88
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	58.7	57.87
VIT_19s0014g02830.t01	Wine grape	cytosol	53.52	57.86
KRH63901	Soybean	cytosol, nucleus, plasma membrane	58.92	57.65
CDX85316	Canola	cytosol, nucleus, plasma membrane	58.48	57.59
CDX86335	Canola	cytosol, nucleus, plasma membrane	58.48	57.59
KRH59706	Soybean	cytosol	56.94	57.57
CDY11053	Canola	cytosol, nucleus, plasma membrane	52.53	57.26
KRH54051	Soybean	cytosol, nucleus, plasma membrane	58.26	56.22
CDY06348	Canola	cytosol	49.56	55.15
CDY11054	Canola	cytosol, nucleus, plasma membrane	48.46	53.92
CDY26109	Canola	mitochondrion	34.25	52.71
CDX92675	Canola	cytosol	22.14	52.07
CDY08237	Canola	cytosol, peroxisome, plasma membrane	30.07	51.32
CDX86059	Canola	peroxisome, plasma membrane, plastid	20.82	48.34
CDY08347	Canola	mitochondrion	48.68	46.82
CDY38202	Canola	mitochondrion	46.59	44.86
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	44.71	43.47
CDY25278	Canola	cytosol, peroxisome, plasma membrane	44.27	43.09
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	44.27	43.04
CDY63433	Canola	cytosol	44.6	42.77
CDY09233	Canola	cytosol	40.31	41.4
CDY41031	Canola	cytosol, peroxisome, plasma membrane	45.04	40.22
CDY26689	Canola	cytosol, peroxisome, plasma membrane	43.94	39.23
CDX99140	Canola	cytosol, peroxisome, plasma membrane	34.91	37.56
CDY34341	Canola	nucleus	10.35	36.29
CDY22645	Canola	cytosol	8.15	32.74
CDY70539	Canola	nucleus	10.79	32.03
CDX86058	Canola	cytosol	10.9	28.61
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	2.86	20.47
CDX88061	Canola	plasma membrane	13.11	17.98
CDY44266	Canola	plasma membrane, vacuole	13.66	17.77
CDY69826	Canola	cytosol, plastid, vacuole	6.94	17.65
CDY46972	Canola	plasma membrane, vacuole	13.44	17.48
CDY38013	Canola	golgi, plasma membrane	9.47	17.44
CDY22585	Canola	plasma membrane	13.55	16.97
CDY07230	Canola	plasma membrane	13.11	16.76
CDX90043	Canola	golgi, plasma membrane	10.68	16.7
CDY12264	Canola	plasma membrane	12.67	16.29
CDY38014	Canola	plasma membrane	12.56	16.17
CDY65711	Canola	plasma membrane	12.78	15.68
CDX71600	Canola	plasma membrane	12.78	15.65
CDY68445	Canola	plastid	7.49	12.88
CDY38012	Canola	plasma membrane	3.85	11.55

Protein Annotations

KEGG:00480+1.11.1.-	Gene3D:1.10.238.10	MapMan:10.1.1	Gene3D:2.40.30.10	Gene3D:3.40.50.80	GO:A0A078ECR9
EnsemblPlants:CDX98976	ProteinID:CDX98976	ProteinID:CDX98976.1	ncoils:Coil	InterPro:Cyt_b245_heavy_chain	InterPro:EF-hand-dom_pair
InterPro:EF_hand_dom	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0004601	GO:GO:0005488	GO:GO:0005509	GO:GO:0005575	GO:GO:0008150
GO:GO:0008152	GO:GO:0016020	GO:GO:0016491	GO:GO:0050664	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00107094001
InterPro:IPR002048	InterPro:IPR017927	InterPro:NADPH_Ox	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030
PFAM:PF08414	PRINTS:PR00466	PFscan:PS50222	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF64
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF47473	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0004EEBE8D
SEG:seg	:	:	:	:	:

Description

BnaC09g48590D

Coordinates

chrLK031907:+:955746..959619

Molecular Weight (calculated)

103469.0 Da

IEP (calculated)

9.751

GRAVY (calculated)

-0.248

Length

908 amino acids

Sequence
(BLAST)

001: MQKLGFEDAR HYYPRGTEKP YSDQSPYRGQ SSATIKNTAS TSRYHEEDQP YVEISLDIHD DYVSVYSLKS PDHIGGTGSL LRQGRPGKSN SVLKRVASSF
101: STELKRVASS SVSSSSARKP PRPPLAKFRR SKSRAEQALK GLKFITKTDG VAGWPGVEKR FHDITENTYG LLHRSKFGEC IGINSTDFAL ALFDALRRRE
201: NVNGDSINKN QLQEFWKQIT DQDFDSRLRL FFAMVDRDVD GKLNEAEVKE IISLSASANE LENIRRQADE YAALIMETLD PYHYGYIMID NLEVLLLQAP
301: MEDIRDGETK NLSKMLSHNL RVSQSRNLGE RVYRGVKYLV LDNWKRVWVM ALWIGVMSGL FAWKFMQYKK RSAYQVMGVC VCAAKGAAET LKLNMALVLL
401: PVCRNTITWL RTKTMLSAVV PFDDSLNFHK VIAIGISVGV AIHAISHLAC DFPRLIAANE ETYEPMVKYF GVQTKRYMDF VQSVEGVTGI AMVILMTIAF
501: TLATPWFRRN KLKLPGPLKK ITGFNAFWYS HHLFVIVYSL LIVHGYYVYL IKEWSKKTTW MYLMVPVVLY LSERLIRAFR SGIEAVSILK VAVLPGNVLS
601: LQMSRPSNFR YKSGQYMYLN CSEVSSLEWH PFSITSAPGD EYLSVHVRVL GDWTKQLRQL FSEVCNPRLP DENRPNIADP RLLDNIPDFP RILIDGPYGA
701: PAQDYKNFEV VLLVGLGIGA TPMISIVKDI INNIKGNGDI EEGRNSNRRQ SPIHSMVTPP LSPARRSETF RTKRAYFYWV TREQGSFDWF KNVMDEVALT
801: DRNKVIELHN YCTSVYEEGD ARSALITMLQ SLHHAKHGVD VVSGTRVMSH FARPNWRSVY KRIAVKHPKT RVGVFYCGAA GLVRELRHLA LDFSHNTSTK
901: FCFHKENF

Best Arabidopsis Sequence Match ( AT5G07390.1 )
(BLAST)

001: MMNRSEMQKL GFEHVRYYTE SPYNRGESSA NVATTSNYYG EDEPYVEITL DIHDDSVSVY GLKSPNHRGA GSNYEDQSLL RQGRSGRSNS VLKRLASSVS
101: TGITRVASSV SSSSARKPPR PQLAKLRRSK SRAELALKGL KFITKTDGVT GWPEVEKRFY VMTMTTNGLL HRSRFGECIG MKSTEFALAL FDALARRENV
201: SGDSININEL KEFWKQITDQ DFDSRLRTFF AMVDKDSDGR LNEAEVREII TLSASANELD NIRRQADEYA ALIMEELDPY HYGYIMIENL EILLLQAPMQ
301: DVRDGEGKKL SKMLSQNLMV PQSRNLGARF CRGMKYFLFD NWKRVWVMAL WIGAMAGLFT WKFMEYRKRS AYEVMGVCVC IAKGAAETLK LNMAMILLPV
401: CRNTITWLRT KTKLSAIVPF DDSLNFHKVI AIGISVGVGI HATSHLACDF PRLIAADEDQ YEPMEKYFGP QTKRYLDFVQ SVEGVTGIGM VVLMTIAFTL
501: ATTWFRRNKL NLPGPLKKIT GFNAFWYSHH LFVIVYSLLV VHGFYVYLII EPWYKKTTWM YLMVPVVLYL CERLIRAFRS SVEAVSVLKV AVLPGNVLSL
601: HLSRPSNFRY KSGQYMYLNC SAVSTLEWHP FSITSAPGDD YLSVHIRVLG DWTKQLRSLF SEVCKPRPPD EHRLNRADSK HWDYIPDFPR ILIDGPYGAP
701: AQDYKKFEVV LLVGLGIGAT PMISIVSDII NNLKGVEEGS NRRQSPIHNM VTPPVSPSRK SETFRTKRAY FYWVTREQGS FDWFKNVMDE VTETDRKNVI
801: ELHNYCTSVY EEGDARSALI TMLQSLNHAK HGVDVVSGTR VMSHFARPNW RSVFKRIAVN HPKTRVGVFY CGAAGLVKEL RHLSLDFSHK TSTKFIFHKE
901: NF

Arabidopsis Description

RBOHARespiratory burst oxidase homolog protein A [Source:UniProtKB/Swiss-Prot;Acc:O81209]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.