CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
peroxisome 1
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plasma membrane
BaCelLo:	nucleus
MultiLoc:	peroxisome
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra037329.1-P	Field mustard	cytosol, peroxisome, plasma membrane	99.86	98.2
CDY38013	Canola	golgi, plasma membrane	48.03	69.17
CDX90043	Canola	golgi, plasma membrane	56.06	68.5
CDY69826	Canola	cytosol, plastid, vacuole	34.23	68.07
CDY38014	Canola	plasma membrane	58.87	59.29
CDY38012	Canola	plasma membrane	24.79	58.09
CDY46972	Canola	plasma membrane, vacuole	48.17	49.0
CDY44266	Canola	plasma membrane, vacuole	48.17	49.0
CDX88061	Canola	plasma membrane	45.63	48.94
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	7.46	41.73
CDY68445	Canola	plastid	27.46	36.93
CDY22585	Canola	plasma membrane	32.54	31.86
CDY12264	Canola	plasma membrane	31.27	31.44
CDX71600	Canola	plasma membrane	29.86	28.61
CDY65711	Canola	plasma membrane	29.72	28.51
CDY22644	Canola	plasma membrane	15.35	18.92
CDX86059	Canola	peroxisome, plasma membrane, plastid	9.86	17.9
CDY65632	Canola	nucleus, peroxisome	3.52	17.36
CDX92674	Canola	mitochondrion	8.31	16.95
CDY08237	Canola	cytosol, peroxisome, plasma membrane	11.83	15.79
CDY26109	Canola	mitochondrion	12.39	14.92
CDY06348	Canola	cytosol	16.76	14.58
CDX92671	Canola	cytosol	15.49	14.55
CDY25278	Canola	cytosol, peroxisome, plasma membrane	19.01	14.47
CDX81047	Canola	cytosol	17.32	14.44
CDY08347	Canola	mitochondrion	19.15	14.41
CDX81049	Canola	cytosol	17.32	14.35
CDX78290	Canola	cytosol	17.18	14.29
CDX85316	Canola	cytosol, nucleus, plasma membrane	18.31	14.1
CDY38202	Canola	mitochondrion	18.59	14.0
CDY63433	Canola	cytosol	18.59	13.94
CDX86335	Canola	cytosol, nucleus, plasma membrane	18.03	13.88
CDX70035	Canola	cytosol	16.9	13.54
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	17.75	13.49
CDY35764	Canola	cytosol, nucleus, plasma membrane	17.04	13.46
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	17.61	13.38
CDY11053	Canola	cytosol, nucleus, plasma membrane	15.63	13.33
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	17.18	13.25
CDX98976	Canola	cytosol	16.76	13.11
CDY32647	Canola	cytosol, peroxisome, plasma membrane	16.34	12.75
CDY38845	Canola	cytosol, peroxisome, plasma membrane	16.34	12.75
CDY11054	Canola	cytosol, nucleus, plasma membrane	14.65	12.75
CDY41031	Canola	cytosol, peroxisome, plasma membrane	17.89	12.49
CDY26689	Canola	cytosol, peroxisome, plasma membrane	17.75	12.39
CDY09233	Canola	cytosol	15.07	12.1
CDX99140	Canola	cytosol, peroxisome, plasma membrane	13.94	11.73
CDY22645	Canola	cytosol	2.82	8.85
CDX92675	Canola	cytosol	4.23	7.77
CDX86058	Canola	cytosol	3.24	6.65
CDY70539	Canola	nucleus	2.11	4.9
CDY34341	Canola	nucleus	1.41	3.86

Protein Annotations

Gene3D:2.40.30.10	MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	GO:A0A078EYQ5	EnsemblPlants:CDY07230
ProteinID:CDY07230	ProteinID:CDY07230.1	InterPro:Cyt_b245_heavy_chain	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom
InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0008150	GO:GO:0008152
GO:GO:0016020	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00123593001	InterPro:IPR017927	PFAM:PF01794
PFAM:PF08022	PFAM:PF08030	PRINTS:PR00466	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF41
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0004EEA142	SEG:seg

Description

BnaCnng02450D

Coordinates

chrLK031975:-:961196..964373

Molecular Weight (calculated)

80107.4 Da

IEP (calculated)

9.809

GRAVY (calculated)

0.349

Length

710 amino acids

Sequence
(BLAST)

001: MDHKSARVSA KTPSSGDELK DVIKGLIKLL MLVIFLGYVF IWILMPTLIY RTKWLPVMRT EFGFSTYFGL AGLTLFMLMF PMLLLACLGC LYLHLKKQKT
101: NNHLIREKAT GRGVLAAMRR PMLVKGPLGI VSATELIFLA MFVALLLWNF FIYLRNAFPM ITPQSAAKLH QKIWQAKLEA MAIRIGLVGN ACLAFLFIPV
201: VRGSSLLPVL GLTSESSIKY HIWLGHLLMT IFTVHGLCFV VYWASMHEIS QMVTWSKTEM SNIAGEIALL SGLVMWATSY PSIRRRFFEV FFYSHYLYII
301: FMFFYVLHVG IAFCFIVLPG FYMFMVDRFL RFLQSRDNVR LLSARVLSSN TAELTFSKAK ELMYNPTSTL FVNVPSISKL QWHPFTITSS SNLEPETLSI
401: VIKSEGKWST KLYKMLSTWD HDTDRTLSVS VEGPYGPVST DFLRHDALVM VSGGSGITPF ISIIRDLIAM SQTTTTCETP KITLVCAFKK ASDIAMLDLI
501: LPSSGLKLSS DLNIQIEAFI TKDNEPSDEE TQKIRTVWFK PSPSDRPISA ILGPNSWLWL AAILSSSFII FLIVVGVMTR YYIYPIDQNK SKYNAASRSI
601: LYLLVLCVSI MMTSSAAVLW NKKKYKVEGS KQVQNVDVPK IESTPKESLV QCTNLHFGER PDLKKILLDT KGSSVGVMIC GPKKMRQEVA NICSSGLAEN
701: LHFQSISFSW

Best Arabidopsis Sequence Match ( AT1G01580.2 )
(BLAST)

001: MKENKKQDPW GRVTCMEHAT SLLHPIPTQN SLFIYTLSLP LLPSKQANSI LLTKAIVPIL ISLASERERD RNPERKERME IEKSNNGGSN PSAGEEFKDM
101: IKGVTKFLMM VIFLGTIMLW IMMPTLTYRT KWLPHLRIKF GTSTYFGATG TTLFMYMFPM MVVACLGCVY LHFKNRKSPH HIDRETKGGV WSKLRKPMLV
201: KGPLGIVSVT EITFLAMFVA LLLWCFITYL RNSFATITPK SAAAHDESLW QAKLESAALR LGLIGNICLA FLFLPVARGS SLLPAMGLTS ESSIKYHIWL
301: GHMVMALFTV HGLCYIIYWA SMHEISQMIM WDTKGVSNLA GEIALAAGLV MWATTYPKIR RRFFEVFFYT HYLYIVFMLF FVLHVGISFS FIALPGFYIF
401: LVDRFLRFLQ SRENVRLLAA RILPSDTMEL TFSKNSKLVY SPTSIMFVNI PSISKLQWHP FTITSSSKLE PEKLSIVIKK EGKWSTKLHQ RLSSSDQIDR
501: LAVSVEGPYG PASADFLRHE ALVMVCGGSG ITPFISVIRD LIATSQKETC KIPKITLICA FKKSSEISML DLVLPLSGLE TELSSDINIK IEAFITRDND
601: AGDEAKAGKI KTLWFKPSLS DQSISSILGP NSWLWLGAIL ASSFLIFMII IGIITRYYIY PIDHNTNKIY SLTSKTIIYI LVISVSIMAT CSAAMLWNKK
701: KYGKVESKQV QNVDRPSPTS SPTSSWGYNS LREIESTPQE SLVQRTNLHF GERPNLKKLL LDVEGSSVGV LVCGPKKMRQ KVAEICSSGL AENLHFESIS
801: FSW

Arabidopsis Description

FRO2ferric reduction oxidase 2 [Source:TAIR;Acc:AT1G01580]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.