CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
vacuole 2
extracellular 1
endoplasmic reticulum 1
plasma membrane 3
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, plasma membrane, plastid, vacuole
BaCelLo:	nucleus
ChloroP:	plastid
MultiLoc:	vacuole
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY65711	Canola	plasma membrane	98.38	98.51
AT5G49740.1	Thale cress	plasma membrane	86.64	85.94
AT5G49730.1	Thale cress	plasma membrane	84.48	84.82
VIT_12s0035g02150.t01	Wine grape	plasma membrane	61.67	62.18
KRH11700	Soybean	plasma membrane	58.3	59.02
GSMUA_Achr11P...	Banana	plasma membrane	58.03	58.82
Solyc01g102610.2.1	Tomato	plastid	58.16	58.24
KRH36697	Soybean	plasma membrane	57.62	58.17
PGSC0003DMT400046925	Potato	plasma membrane	57.89	57.89
Os04t0444800-02	Rice	plasma membrane	52.9	51.72
TraesCS2B01G329600.1	Wheat	plasma membrane	51.42	51.0
Zm00001d003559_P001	Maize	plasma membrane	52.23	50.92
TraesCS2A01G312600.1	Wheat	plasma membrane	51.28	50.8
TraesCS2D01G311100.1	Wheat	plasma membrane	50.61	50.2
EES10867	Sorghum	plasma membrane	51.82	50.13
HORVU2Hr1G077650.1	Barley	peroxisome, plastid	47.1	46.97
CDX68510	Canola	extracellular, mitochondrion, plasma membrane, plastid	5.67	33.07
CDY38013	Canola	golgi, plasma membrane	20.51	30.83
CDX88061	Canola	plasma membrane	27.26	30.51
CDX90043	Canola	golgi, plasma membrane	23.89	30.46
CDY44266	Canola	plasma membrane, vacuole	28.48	30.23
CDY46972	Canola	plasma membrane, vacuole	28.21	29.94
CDY07230	Canola	plasma membrane	28.61	29.86
CDY38014	Canola	plasma membrane	28.07	29.5
CDY69826	Canola	cytosol, plastid, vacuole	13.36	27.73
CDY22585	Canola	plasma membrane	26.99	27.59
CDY12264	Canola	plasma membrane	25.37	26.63
CDY38012	Canola	plasma membrane	9.72	23.76
CDY68445	Canola	plastid	14.71	20.64
CDX86059	Canola	peroxisome, plasma membrane, plastid	10.8	20.46
CDX92674	Canola	mitochondrion	8.5	18.1
CDY22644	Canola	plasma membrane	13.63	17.53
CDY65632	Canola	nucleus, peroxisome	3.37	17.36
CDX92671	Canola	cytosol	15.25	14.95
CDY11053	Canola	cytosol, nucleus, plasma membrane	15.92	14.17
CDY08237	Canola	cytosol, peroxisome, plasma membrane	10.12	14.1
CDY09233	Canola	cytosol	16.46	13.8
CDX81049	Canola	cytosol	15.79	13.65
CDX99140	Canola	cytosol, peroxisome, plasma membrane	15.38	13.51
CDY08347	Canola	mitochondrion	17.14	13.45
CDX81047	Canola	cytosol	15.38	13.38
CDX70035	Canola	cytosol	15.92	13.32
CDY25278	Canola	cytosol, peroxisome, plasma membrane	16.73	13.29
CDX78290	Canola	cytosol	15.25	13.23
CDY26109	Canola	mitochondrion	10.53	13.22
CDY38202	Canola	mitochondrion	16.73	13.15
CDY06348	Canola	cytosol	14.44	13.11
CDY21676	Canola	cytosol, peroxisome, plasma membrane, plastid	16.46	13.06
CDX86335	Canola	cytosol, nucleus, plasma membrane	16.06	12.91
CDX81920	Canola	cytosol, nucleus, plasma membrane, plastid	16.19	12.85
CDY63433	Canola	cytosol	16.33	12.78
CDX98976	Canola	cytosol	15.65	12.78
CDY45918	Canola	cytosol, nucleus, plasma membrane, plastid	15.79	12.7
CDY35764	Canola	cytosol, nucleus, plasma membrane	15.38	12.68
CDX85316	Canola	cytosol, nucleus, plasma membrane	15.65	12.58
CDY41031	Canola	cytosol, peroxisome, plasma membrane	17.14	12.49
CDY38845	Canola	cytosol, peroxisome, plasma membrane	15.25	12.42
CDY32647	Canola	cytosol, peroxisome, plasma membrane	15.25	12.42
CDY11054	Canola	cytosol, nucleus, plasma membrane	13.5	12.25
CDY26689	Canola	cytosol, peroxisome, plasma membrane	16.6	12.09
CDY70539	Canola	nucleus	3.1	7.52
CDX92675	Canola	cytosol	3.91	7.51
CDX86058	Canola	cytosol	3.24	6.94
CDY34341	Canola	nucleus	2.29	6.56
CDY22645	Canola	cytosol	1.48	4.87

Protein Annotations

MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	GO:A0A078C452	EnsemblPlants:CDX71600	ProteinID:CDX71600
ProteinID:CDX71600.1	InterPro:FAD-bd_8	InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00152139001
InterPro:IPR017927	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	PFscan:PS51384	PANTHER:PTHR11972
PANTHER:PTHR11972:SF41	InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0004EC3464
SEG:seg	:	:	:	:	:

Description

BnaC09g26410D

Coordinates

chrLK031794:+:888973..892799

Molecular Weight (calculated)

83377.3 Da

IEP (calculated)

7.495

GRAVY (calculated)

0.429

Length

741 amino acids

Sequence
(BLAST)

001: MDDHESPLLS KESSSSSSSS SVVASSFKWI LKVLMSVIFV AWVVFLFVYP GKLGDGILTN WRAVSSHTLF GTTGSMFLIF SGPILVISVL ASLYLIISGE
101: ENVFTKKKIS KFPRFRLWTF PVLVDGPFGV VSAAEFLGIM IFSVFFLWAI YAYTMRDLDL LDLFHVLPED RSMLLLEITG LRFGMIGLLC MVFLFLPISR
201: GSILLRLVDI PFEHATKYHV WLGHITMAFF SFHGLCYVVA WTVQGRLLEL LFEWKAIGIA VLPGVISLVA GLLMWVTSLQ YVRKHYFELF FYTHQLYIVF
301: VVFLALHVGD YLFSIVAGGI FLFILDRFLR FCQSRRTVDV ISAKSFPCGT LELVLSKPPN MRYNALSFVF LQVRELSWLQ WHPFSVSSSP LDGKHHVAVL
401: IKVLGGWTAK LRDKLSKLYE AENPDQLLSP LSYPKITTCV EGPYGHESPY HLAYENLVLV AGGIGISPFF AILSDILQRK RDGKACLPKK VLVIWAIKNS
501: DELSLLSSID IPSLCPSFSQ KMNLEINIYV TRQSEPLLED GMVHKMVNPS VKPRSNGCPM SVLVGTGDNI WSGLYLVSST IGFVLMITLL DIFYINKFNI
601: TAWWYKGLLF VVCMVASVLI FGGLVVVFWN LWGEKAGDVE PNGHDKVTTN GEELHNPSAE LKGLNTEDDI QSFITTRYGT RPDFKEIFES LNEKWGSVDV
701: GVIVCGPASL QSTVAKEIRS HSIWRSTNHP LFHFNSHSFD L

Best Arabidopsis Sequence Match ( AT5G49740.1 )
(BLAST)

001: MDDHETPLLS KDLSSSSSSS SSSSSVVVSS LKWILKVVMS VIFVTWVVFL MMYPGSLGDQ ILTNWRAISS NTLFGLTGSM FLIFSGPILV IAILASLYLI
101: ISGEETVFTK KKITKFPRFR LWTFPVLVDG PFGVVSAAEF LGIMVFSVFF LWAIYAYTLR NLNVLDYFHV LPNNRSIFLL ELTGLRFGMI GLLCMVFLFL
201: PISRGSILLR LIDIPFEHAT RYHVWLGHIT MTFFSLHGLC YVVGWTIQGQ LLELLFEWKA TGIAVLPGVI SLVAGLLMWV TSLHTVRKNY FELFFYTHQL
301: YIVFVVFLAL HVGDYLFSIV AGGIFLFILD RFLRFYQSRR TVDVISAKSL PCGTLELVLS KPPNMRYNAL SFIFLQVKEL SWLQWHPFSV SSSPLDGNHH
401: VAVLIKVLGG WTAKLRDQLS TLYEAENQDQ LISPESYPKI TTCVEGPYGH ESPYHLAYEN LVLVAGGIGI TPFFAILSDI LHRKRDGKDC LPGKVLVVWA
501: IKNSDELSLL SAIDIPSICH FFSKKLNLEI HIYVTRQSEP CLEDGMVHKV VHPSVKTPWT NGCSMSVLVG TGDNIWSGLY LIISTIGFIA MITLVDIFYI
601: NKYNITTWWY KGLLFVVCMV ASVLIFGGLV VVFWHRWEHK TGEVEANGND KVDLNGEETH NPSAAELKGL AIEEDVQNYT TIRYGTRPAF REIFESLNGK
701: WGSVDVGVIV CGPATLQTTV AKEIRSHSIW RSANHPLFHF NSHSFDL

Arabidopsis Description

FRO7Ferric reduction oxidase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q3KTM0]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.