Factsheet for PGSC0003DMT400046925

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g102610.2.1	Tomato	plastid	95.41	95.54
VIT_12s0035g02150.t01	Wine grape	plasma membrane	64.24	64.76
KRH11700	Soybean	plasma membrane	60.19	60.93
KRH36697	Soybean	plasma membrane	59.38	59.95
GSMUA_Achr11P...	Banana	plasma membrane	58.3	59.1
AT5G49730.1	Thale cress	plasma membrane	58.57	58.81
AT5G49740.1	Thale cress	plasma membrane	58.57	58.1
CDX71600	Canola	plasma membrane	57.89	57.89
CDY65711	Canola	plasma membrane	57.76	57.84
Bra037953.1-P	Field mustard	plasma membrane	57.62	57.7
TraesCS2D01G311100.1	Wheat	plasma membrane	54.66	54.22
TraesCS2B01G329600.1	Wheat	plasma membrane	54.52	54.08
TraesCS2A01G312600.1	Wheat	plasma membrane	54.52	54.01
Os04t0444800-02	Rice	plasma membrane	54.52	53.3
Zm00001d003559_P001	Maize	plasma membrane	53.85	52.5
EES10867	Sorghum	plasma membrane	52.77	51.04
HORVU2Hr1G077650.1	Barley	peroxisome, plastid	48.58	48.45
PGSC0003DMT400000536	Potato	plastid	30.23	31.07
PGSC0003DMT400046647	Potato	plasma membrane	28.48	30.19
PGSC0003DMT400024558	Potato	plasma membrane, vacuole	27.67	29.0
PGSC0003DMT400026254	Potato	plasma membrane	27.53	28.94
PGSC0003DMT400074349	Potato	plasma membrane	26.86	26.64
PGSC0003DMT400040179	Potato	cytosol	16.87	16.11
PGSC0003DMT400032088	Potato	cytosol, nucleus, peroxisome	3.78	15.64
PGSC0003DMT400078138	Potato	cytosol, nucleus, plastid	17.27	15.35
PGSC0003DMT400035268	Potato	mitochondrion	19.43	15.32
PGSC0003DMT400063688	Potato	cytosol	17.68	15.11
PGSC0003DMT400036734	Potato	cytosol, nucleus, plasma membrane	17.68	13.97
PGSC0003DMT400066027	Potato	peroxisome	8.23	13.32

Protein Annotations

EntrezGene:102594930	MapMan:25.4.2.1	MapMan:25.5.2.1	Gene3D:3.40.50.80	InterPro:Cyt_b245_heavy_chain	InterPro:FAD-bd_8
InterPro:Fd_Rdtase_FAD-bd	InterPro:Fe3_Rdtase_TM_dom	InterPro:Fe_red_NAD-bd_6	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0008150	GO:GO:0008152	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
InterPro:IPR017927	UniProt:M1BJV5	PFAM:PF01794	PFAM:PF08022	PFAM:PF08030	EnsemblPlantsGene:PGSC0003DMG401018223
PGSC:PGSC0003DMG401018223	EnsemblPlants:PGSC0003DMT400046925	PRINTS:PR00466	PFscan:PS51384	PANTHER:PTHR11972	PANTHER:PTHR11972:SF41
InterPro:Riboflavin_synthase-like_b-brl	SUPFAM:SSF52343	SUPFAM:SSF63380	TMHMM:TMhelix	UniParc:UPI0002956B89	RefSeq:XP_006358487.1
SEG:seg	:	:	:	:	:

Description

Ferric-chelate reductase [Source:PGSC_GENE;Acc:PGSC0003DMG401018223]

Coordinates

chr1:-:79287174..79291540

Molecular Weight (calculated)

83034.0 Da

IEP (calculated)

7.523

GRAVY (calculated)

0.375

Length

741 amino acids

Sequence
(BLAST)

001: MGELSSQEPL LLKKDDEFDY LNKTPLLVSS TKLILKVVMW VAFITWAAFI FLLPTKFTNE LFGTIVTATK GSIFGTAGST SLIFSFPIIL IAFLAIIRLV
101: VAGEDQPQIK KAGKGPNFRL WTFPVLVDGP FGVVTAAEMI GVIIFSVYIV WAVVMYSIQN VDLLSSYHLP DMKERSGKLL ELTGLRFGFI GLICLAFLFL
201: PVARGSVLLR AIDIPFEHAT RYHVWLGHLT MAIFSLHGLF YIIGWAIQGR LLEELVGWKN IGIANLPGVI SLLAGLLMWV TSLPGVRRNN FELFFYTHQL
301: YVVFVVFLAL HVGDFVFMMA GAGIFLFMLD RFLRFFQSRK TVDILSATCF PCGTVELVIS KPANLHYNAL GWIFLQIREL SWLQWHPFSV SSSPLDGKHH
401: LAILIKVLGD WTEKLKGNIL NLSVEQSETE PLLQHNRKMT ASVEGPYGHE SPYHLTYENL ILVAGGIGIS PFLAILSDIL HCINDSSPCL PRNILIVWAI
501: KNSDELPLLE TVDMEAICPL FSDKLNLEIQ TYVTRESQPS LEEGKTPKAM HHSSISPGFN GCRMSGLVGT GHVVWSGLYV IVSTIGFVIT VALLDIFYIN
601: PFNITYWWYK GLLLIGCMTA SILIFGGLVI ALWHLWERKT SSKEEPQDAT KKVDILQQNE ASLHRNFGEA RYVNNIRYGQ RPDFQEIFGS HAKSWGSVDI
701: GVIVCGPPTL QSSVAKECRS QNLKRRGHQA IFHFNSHSFD L

Best Arabidopsis Sequence Match ( AT5G49730.1 )
(BLAST)

001: MDDYETPLLS KDSSSSSSVI TSSLKWILKV VMSMIFVTWV VFLMMMYPEQ LGDDFLTFVS SKTFLGTTGT MFLIFSCPIL VISVLASLYL IISGEDKVFT
101: KKKISKFPRF RLWTFPVLVD GPFGVVSAAE FLGIMVFSVF FLWSIYAYTL RNLDLLERFH VLPKNRSILL LEVTGLRLGM IGLLCMVFLF LPISRGSILL
201: RLIDIPFEHA TRYHVWLGHI TMAFFSLHGL CYVVGWIIQG QLLELIFSWN AIGIAILPGV ISLVAGLLMW VTSLHTVRKN YFELFFYTHQ LYIVFIVFLA
301: LHVGDYMFSI VAGGIFLFIL DRFLRFCQSR RTVDVISAKS LPCGTLELVL SKPPNMRYNA LSFIFLQVRE LSWLQWHPFS VSSSPLDGNH HVAVLIKVLG
401: GWTAKLRDQL SNLYEAENQD QLISPQSYPK ITTCVEGPYG HESPYHLAYE NLVLVAGGIG ITPFFAILSD ILHRKRDGKA CLPSKVLVVW AIKNSDELSL
501: LSAIDIPSIC PFFSKKLNLE IHIYITRQSE PRLEDGMVHK VVHPSVKLPR TNGCSMSVLV GTGDNIWSGL YLIISTIGFI SMITLLDIFY IKRYNITTWW
601: YKGLLFVGCM VASVLIFGGL VVVFWHRWEH KTGEVEANGN DKVDLNGEET HNPSAAELKG LAIEEDVQNY TTIRYGTRPA FREIFESLNG KWGSVDVGVI
701: VCGPATLQTT VAKEIRSHSI WRSANHPLFH FNSHSFDL

Arabidopsis Description

FRO6Ferric reduction oxidase 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWS6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.