Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, plastid
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS2B01G329600.1 | Wheat | plasma membrane | 81.16 | 80.72 |
| TraesCS2A01G312600.1 | Wheat | plasma membrane | 81.16 | 80.61 |
| TraesCS2D01G311100.1 | Wheat | plasma membrane | 81.02 | 80.59 |
| Os04t0444800-02 | Rice | plasma membrane | 68.24 | 66.89 |
| Zm00001d003559_P001 | Maize | plasma membrane | 68.24 | 66.71 |
| EES10867 | Sorghum | plasma membrane | 67.16 | 65.14 |
| GSMUA_Achr11P... | Banana | plasma membrane | 54.51 | 55.4 |
| VIT_12s0035g02150.t01 | Wine grape | plasma membrane | 48.99 | 49.52 |
| KRH36697 | Soybean | plasma membrane | 48.18 | 48.77 |
| PGSC0003DMT400046925 | Potato | plasma membrane | 48.45 | 48.58 |
| KRH11700 | Soybean | plasma membrane | 47.64 | 48.36 |
| Solyc01g102610.2.1 | Tomato | plastid | 48.05 | 48.24 |
| Bra037953.1-P | Field mustard | plasma membrane | 46.97 | 47.16 |
| CDY65711 | Canola | plasma membrane | 46.97 | 47.16 |
| CDX71600 | Canola | plasma membrane | 46.97 | 47.1 |
| AT5G49740.1 | Thale cress | plasma membrane | 47.11 | 46.85 |
| AT5G49730.1 | Thale cress | plasma membrane | 46.16 | 46.48 |
| HORVU2Hr1G094150.3 | Barley | golgi, plasma membrane | 13.59 | 36.2 |
| HORVU1Hr1G091930.1 | Barley | peroxisome, plasma membrane | 9.83 | 15.84 |
| HORVU5Hr1G024550.3 | Barley | cytosol | 15.21 | 13.15 |
| HORVU3Hr1G069780.1 | Barley | mitochondrion | 16.42 | 13.02 |
| HORVU3Hr1G087210.4 | Barley | peroxisome, plastid | 14.4 | 12.36 |
| HORVU4Hr1G086500.1 | Barley | cytosol | 13.86 | 12.19 |
| HORVU5Hr1G062490.8 | Barley | plasma membrane | 16.15 | 12.16 |
| HORVU1Hr1G081950.8 | Barley | plastid | 15.88 | 12.14 |
| HORVU4Hr1G081670.1 | Barley | cytosol | 15.75 | 11.98 |
| HORVU1Hr1G072160.5 | Barley | cytosol | 14.94 | 11.87 |
| HORVU1Hr1G072140.1 | Barley | cytosol | 13.86 | 11.09 |
| HORVU6Hr1G035970.2 | Barley | mitochondrion | 13.46 | 10.43 |
| HORVU1Hr1G071340.13 | Barley | mitochondrion, peroxisome, plastid | 14.13 | 10.39 |
| HORVU5Hr1G078630.1 | Barley | cytosol | 12.25 | 9.43 |
| HORVU0Hr1G013380.4 | Barley | plastid | 7.4 | 7.0 |
| HORVU3Hr1G037600.3 | Barley | cytosol, peroxisome, plastid | 3.5 | 5.66 |
| HORVU3Hr1G069690.1 | Barley | mitochondrion | 0.67 | 4.13 |
Protein Annotations
| MapMan:25.4.2.1 | MapMan:25.5.2.1 | Gene3D:3.40.50.80 | UniProt:A0A287IJC1 | ncoils:Coil | InterPro:FAD-bd_8 |
| InterPro:Fd_Rdtase_FAD-bd | InterPro:Fe3_Rdtase_TM_dom | InterPro:Fe_red_NAD-bd_6 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005575 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0016491 | GO:GO:0055114 |
| EnsemblPlantsGene:HORVU2Hr1G077650 | EnsemblPlants:HORVU2Hr1G077650.1 | InterPro:IPR017927 | PFAM:PF01794 | PFAM:PF08022 | PFAM:PF08030 |
| PFscan:PS51384 | PANTHER:PTHR11972 | PANTHER:PTHR11972:SF41 | InterPro:Riboflavin_synthase-like_b-brl | SUPFAM:SSF52343 | SUPFAM:SSF63380 |
| TMHMM:TMhelix | UniParc:UPI000B4783FB | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr2H:+:561793518..561798024
Molecular Weight (calculated)
72193.8 Da
IEP (calculated)
8.442
GRAVY (calculated)
0.485
Length
743 amino acids
Sequence
(BLAST)
(BLAST)
001: PDHPPAGSLV SFTPPRRHAM TQEREPLLQN AAAGAKGSPA VLPSLARSVL KFLMWAVFLT WAAGIFFYPT APVQAAFRRW AAIASTEGLI TGLTGSVFLF
101: FSGPILIIAA LAYVYIFAFP GDHVGKKKLR SLSFRLWTYP VLVDGPFGVV SAAEFIGIVM FIVYVVFSMT YYVVDSVSLI SQAHLPPTTR SELLLALIGL
201: RFGSVGLFCM IFLFLPVSRG SVLLRIIDIP FEHATRYHVW LGHLTMALFT LHGLCYVISY SLLGRLIEEL TQWKQVGIAN LPGVISLVAG LLMWVTSLHP
301: VRKRFFELFF YTHQLYVVFV VFLVLHVGDF VFSISAGAVF LFMLDRFLRF WQSRAKVDIV SAACRPCGTV ELVFSKPASL RYNALSFIFV QVRELSFLQW
401: HPFSVSSSPM DGRYHMSILI KVLGTWTDTL KRIITDVQEQ KTRSDSDSDQ SQTGRITASI EGPYGHESPY HLMYENLILV AGGIGISPFV AILSDIIHRI
501: EQGMPCAPKN VLVLWSVKKT SELSLLLAVD AQSISSSVCD KLHLDIQAFV TQESDPPLED GIVGDDQKAP GMFVKNGAAM SGLVGTGDNF WAAMYFAAST
601: LGSVLAFVLV QLYYVKRFNV YAWWHLGLLL LLCMAAGIAL PGGLVVXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXNSHS FDL
101: FSGPILIIAA LAYVYIFAFP GDHVGKKKLR SLSFRLWTYP VLVDGPFGVV SAAEFIGIVM FIVYVVFSMT YYVVDSVSLI SQAHLPPTTR SELLLALIGL
201: RFGSVGLFCM IFLFLPVSRG SVLLRIIDIP FEHATRYHVW LGHLTMALFT LHGLCYVISY SLLGRLIEEL TQWKQVGIAN LPGVISLVAG LLMWVTSLHP
301: VRKRFFELFF YTHQLYVVFV VFLVLHVGDF VFSISAGAVF LFMLDRFLRF WQSRAKVDIV SAACRPCGTV ELVFSKPASL RYNALSFIFV QVRELSFLQW
401: HPFSVSSSPM DGRYHMSILI KVLGTWTDTL KRIITDVQEQ KTRSDSDSDQ SQTGRITASI EGPYGHESPY HLMYENLILV AGGIGISPFV AILSDIIHRI
501: EQGMPCAPKN VLVLWSVKKT SELSLLLAVD AQSISSSVCD KLHLDIQAFV TQESDPPLED GIVGDDQKAP GMFVKNGAAM SGLVGTGDNF WAAMYFAAST
601: LGSVLAFVLV QLYYVKRFNV YAWWHLGLLL LLCMAAGIAL PGGLVVXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
701: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXNSHS FDL
001: MDDHETPLLS KDLSSSSSSS SSSSSVVVSS LKWILKVVMS VIFVTWVVFL MMYPGSLGDQ ILTNWRAISS NTLFGLTGSM FLIFSGPILV IAILASLYLI
101: ISGEETVFTK KKITKFPRFR LWTFPVLVDG PFGVVSAAEF LGIMVFSVFF LWAIYAYTLR NLNVLDYFHV LPNNRSIFLL ELTGLRFGMI GLLCMVFLFL
201: PISRGSILLR LIDIPFEHAT RYHVWLGHIT MTFFSLHGLC YVVGWTIQGQ LLELLFEWKA TGIAVLPGVI SLVAGLLMWV TSLHTVRKNY FELFFYTHQL
301: YIVFVVFLAL HVGDYLFSIV AGGIFLFILD RFLRFYQSRR TVDVISAKSL PCGTLELVLS KPPNMRYNAL SFIFLQVKEL SWLQWHPFSV SSSPLDGNHH
401: VAVLIKVLGG WTAKLRDQLS TLYEAENQDQ LISPESYPKI TTCVEGPYGH ESPYHLAYEN LVLVAGGIGI TPFFAILSDI LHRKRDGKDC LPGKVLVVWA
501: IKNSDELSLL SAIDIPSICH FFSKKLNLEI HIYVTRQSEP CLEDGMVHKV VHPSVKTPWT NGCSMSVLVG TGDNIWSGLY LIISTIGFIA MITLVDIFYI
601: NKYNITTWWY KGLLFVVCMV ASVLIFGGLV VVFWHRWEHK TGEVEANGND KVDLNGEETH NPSAAELKGL AIEEDVQNYT TIRYGTRPAF RGIHYKISGV
701: KSSYLVFLFI KL
101: ISGEETVFTK KKITKFPRFR LWTFPVLVDG PFGVVSAAEF LGIMVFSVFF LWAIYAYTLR NLNVLDYFHV LPNNRSIFLL ELTGLRFGMI GLLCMVFLFL
201: PISRGSILLR LIDIPFEHAT RYHVWLGHIT MTFFSLHGLC YVVGWTIQGQ LLELLFEWKA TGIAVLPGVI SLVAGLLMWV TSLHTVRKNY FELFFYTHQL
301: YIVFVVFLAL HVGDYLFSIV AGGIFLFILD RFLRFYQSRR TVDVISAKSL PCGTLELVLS KPPNMRYNAL SFIFLQVKEL SWLQWHPFSV SSSPLDGNHH
401: VAVLIKVLGG WTAKLRDQLS TLYEAENQDQ LISPESYPKI TTCVEGPYGH ESPYHLAYEN LVLVAGGIGI TPFFAILSDI LHRKRDGKDC LPGKVLVVWA
501: IKNSDELSLL SAIDIPSICH FFSKKLNLEI HIYVTRQSEP CLEDGMVHKV VHPSVKTPWT NGCSMSVLVG TGDNIWSGLY LIISTIGFIA MITLVDIFYI
601: NKYNITTWWY KGLLFVVCMV ASVLIFGGLV VVFWHRWEHK TGEVEANGND KVDLNGEETH NPSAAELKGL AIEEDVQNYT TIRYGTRPAF RGIHYKISGV
701: KSSYLVFLFI KL
Arabidopsis Description
FRO7Ferric reduction oxidase 7, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q3KTM0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.