Factsheet for AT4G21260.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

endoplasmic reticulum 5
golgi 6
extracellular 5
vacuole 4
plasma membrane 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G21250.1	Thale cress	plasma membrane	67.94	59.47
AT1G61740.1	Thale cress	plasma membrane	48.85	41.92
VIT_00s0532g00060.t01	Wine grape	plasma membrane	48.85	41.92
Solyc02g079980.2.1	Tomato	plasma membrane	48.09	41.18
PGSC0003DMT400055932	Potato	plasma membrane	47.84	40.69
KRH49901	Soybean	plasma membrane	48.6	40.38
KRH41998	Soybean	plasma membrane	48.6	40.38
Solyc03g031530.2.1	Tomato	plasma membrane	45.29	39.12
KRH21651	Soybean	plasma membrane	46.82	39.07
AT1G11540.2	Thale cress	plasma membrane	43.77	38.22
TraesCS4A01G424800.1	Wheat	plasma membrane	19.34	36.72
GSMUA_Achr4P33580_001	Banana	golgi, plasma membrane, plastid	17.56	34.85
Os01t0786700-00	Rice	plasma membrane	33.33	33.0
Os01t0786800-01	Rice	plasma membrane	35.88	32.49
Zm00001d043240_P002	Maize	plasma membrane	36.64	31.37
TraesCS3A01G324800.1	Wheat	plasma membrane	36.64	31.37
TraesCS3D01G318100.1	Wheat	plasma membrane	37.4	31.28
TraesCS3B01G353800.1	Wheat	plasma membrane	37.15	31.13
TraesCS7D01G059100.1	Wheat	plasma membrane, plastid	33.84	30.86
GSMUA_Achr6P00570_001	Banana	plasma membrane	36.39	30.69
HORVU7Hr1G012180.2	Barley	plastid	33.08	30.02
EER96273	Sorghum	plasma membrane	32.82	29.86
TraesCS7A01G064300.1	Wheat	plasma membrane, plastid	32.06	28.7
OQU87698	Sorghum	plasma membrane	37.15	27.92
GSMUA_Achr4P33570_001	Banana	extracellular, plasma membrane	19.59	27.8
AT2G36630.1	Thale cress	plasma membrane	26.72	22.88
AT2G25737.1	Thale cress	plasma membrane	26.72	22.06
HORVU3Hr1G077570.1	Barley	peroxisome	18.32	21.82
HORVU3Hr1G077530.9	Barley	plasma membrane	21.37	18.06

Protein Annotations

ArrayExpress:AT4G21260	EnsemblPlants:AT4G21260.1	EnsemblPlantsGene:AT4G21260	GO:GO:0003674	GO:GO:0005575	GO:GO:0005623
GO:GO:0005886	GO:GO:0016020	GO:GO:0016021	InterPro:TM_pro_TauE-like	PANTHER:PTHR14255	PANTHER:PTHR14255:SF3
PFAM:PF01925	RefSeq:AT4G21260	RefSeq:AT4G21260-TAIR-G	SEG:seg	SignalP:SignalP-noTM	TAIR:AT4G21260
TAIR:AT4G21260.1	TMHMM:TMhelix	Unigene:At.54453	UniParc:UPI000009F66F	MapMan:24.2.6.2	:

Description

No Description!

Coordinates

chr4:+:11327543..11329057

Molecular Weight (calculated)

43460.0 Da

IEP (calculated)

8.471

GRAVY (calculated)

0.552

Length

393 amino acids

Sequence
(BLAST)

001: MKTLFVLFIL ILCVFAINAN QQEEINQEST QQTHQNLLYK VQKWRTSLKD SSDAELKLSP ALVVAGVLCF TAALISSASG IDLKAASSFS AFMVTGGSIA
101: NLINNHFGCK KLIDYDLALL LEPCMLLGVS VGVICNKVFP EWLITGLFVV FLMWSSMETC ENGHTSWKLS LILREKEDMR DSRLAEVKRR RTIIFFKHLY
201: LKIKKTETKQ SFLGRNLGII SIKPCSVEYW ILLSLQIPLA LVFTILALSR TESLQEQSIS NQEAGLLGGI FGIGGGMIIS PLLLRAGIPP QVTAATTSFM
301: VFFSATMSGV QYLLLGMQNT EAAYVFSVIC FFASTLGLVF AQKVVPHFRR ASIIVFLVGT MMYLTTIVMA SFGILVFYID NDAGKDIGFQ LPC

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.