Factsheet for VIT_00s0532g00060.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 9
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

Inferred distinct locusB in Crop

locusB	locations
VIT_01s0011g06410.t01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G61740.1	VIT_01s0011g06410.t01	AT2G01950.1	19000166

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49901	Soybean	plasma membrane	62.88	60.89
KRH41998	Soybean	plasma membrane	62.45	60.47
PGSC0003DMT400055932	Potato	plasma membrane	60.7	60.17
Solyc02g079980.2.1	Tomato	plasma membrane	60.26	60.13
KRH21651	Soybean	plasma membrane	60.92	59.24
Solyc03g031530.2.1	Tomato	plasma membrane	58.3	58.68
AT4G21250.1	Thale cress	plasma membrane	55.24	56.35
Bra013516.1-P	Field mustard	plasma membrane	48.03	55.56
CDX82815	Canola	plasma membrane	49.78	55.21
CDX79051	Canola	plasma membrane	49.34	54.72
Bra031401.1-P	Field mustard	plasma membrane	54.15	53.91
CDY52324	Canola	plasma membrane	54.15	53.91
AT1G61740.1	Thale cress	plasma membrane	53.71	53.71
CDY61959	Canola	plasma membrane	52.84	52.72
Bra027077.1-P	Field mustard	plasma membrane	52.4	52.29
CDY12912	Canola	plasma membrane	52.4	52.29
AT1G11540.2	Thale cress	plasma membrane	50.66	51.56
AT4G21260.1	Thale cress	plasma membrane	41.92	48.85
CDY25317	Canola	plasma membrane	30.13	45.7
Os01t0786700-00	Rice	plasma membrane	38.43	44.33
TraesCS4A01G424800.1	Wheat	plasma membrane	19.87	43.96
Os01t0786800-01	Rice	plasma membrane	41.27	43.55
GSMUA_Achr4P33580_001	Banana	golgi, plasma membrane, plastid	18.78	43.43
Zm00001d043240_P002	Maize	plasma membrane	43.23	43.14
GSMUA_Achr6P00570_001	Banana	plasma membrane	42.79	42.06
TraesCS3A01G324800.1	Wheat	plasma membrane	42.14	42.05
TraesCS3D01G318100.1	Wheat	plasma membrane	42.79	41.7
TraesCS3B01G353800.1	Wheat	plasma membrane	42.36	41.36
TraesCS7D01G059100.1	Wheat	plasma membrane, plastid	37.99	40.37
HORVU7Hr1G012180.2	Barley	plastid	37.99	40.18
EER96273	Sorghum	plasma membrane	37.34	39.58
OQU87698	Sorghum	plasma membrane	45.2	39.58
GSMUA_Achr4P33570_001	Banana	extracellular, plasma membrane	22.93	37.91
TraesCS7A01G064300.1	Wheat	plasma membrane, plastid	36.03	37.59
VIT_16s0039g02390.t01	Wine grape	cytosol, endoplasmic reticulum, extracellular	6.77	31.0
HORVU3Hr1G077570.1	Barley	peroxisome	22.05	30.61
VIT_09s0002g04240.t01	Wine grape	mitochondrion, plasma membrane	29.48	28.07
VIT_04s0008g03820.t01	Wine grape	golgi, plasma membrane, vacuole	29.04	27.82
VIT_08s0007g04230.t01	Wine grape	plasma membrane	27.51	26.87
VIT_04s0023g01600.t01	Wine grape	plasma membrane	27.29	25.99
HORVU3Hr1G077530.9	Barley	plasma membrane	24.24	23.87
VIT_16s0039g02290.t01	Wine grape	plasma membrane	8.08	22.42

Protein Annotations

EntrezGene:100252710	wikigene:100252710	MapMan:24.2.6.2	ProteinID:CBI33227	ProteinID:CBI33227.3	UniProt:D7TRV1
EMBL:FN596044	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	EntrezGene:LOC100252710	wikigene:LOC100252710
PFAM:PF01925	PANTHER:PTHR14255	PANTHER:PTHR14255:SF3	SignalP:SignalP-noTM	InterPro:TM_pro_TauE-like	TMHMM:TMhelix
UniParc:UPI000198601D	ArrayExpress:VIT_00s0532g00060	EnsemblPlantsGene:VIT_00s0532g00060	EnsemblPlants:VIT_00s0532g00060.t01	RefSeq:XP_002275818	RefSeq:XP_002275818.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrUn:-:31437826..31439536

Molecular Weight (calculated)

50079.1 Da

IEP (calculated)

6.844

GRAVY (calculated)

0.589

Length

458 amino acids

Sequence
(BLAST)

001: MKGHTLMRRA VLLPLFILFS LSHAEQSQPI SDVPKMEELT NTSHQWSNLQ KVFQEIQLKF SPPIVRAAVL CFIAASISSA GGIGGGGLFV PILAIVGGLD
101: LKTASTFSAF MVAGGSTANI LCTMFINCIH GGKSVIDFDI ALLSEPCLLL GVSIGVVCNI VFPEWLITIL FVVFLSWTTS KTCRKGVVSW KLESEVIRRN
201: GFGELENGVR RDESNGENEV IKSLKEPLMG EVENFKISIP WTKFGALVVI WLSFFLLYIL RGDRDGQSII PMEPCGEGYW ILSSLQFPLA ITFTAWILHR
301: RETSNQQEIL GQTGEKPPNL IFPIMALLAG ILGGVFGIGG GMLISPLLLH IGIPPEVTAA TCSVMVFFSS TMSSFQYLLI GMEHKEVALI FAIICFFASI
401: LGVVVVQRAI EKYGRASLIV FSVSTVMALS TVLITSFGAI DVWRDYARGE YMGFKLPC

Best Arabidopsis Sequence Match ( AT4G21250.1 )
(BLAST)

001: MKTLFVLFLL LLCVFAINAN QEEENLPQSH HNLLHKVQQW RTSLKESSAA ELKLSSAIIM AGVLCFLAAL ISSAGGIGGG GLFIPIMTIV AGVDLKTASS
101: FSAFMVTGGS IANVISNLFG GKALLDYDLA LLLEPCMLLG VSIGVICNRV LPEWLITVLF AVFLAWSSLK TCRSGVKFWK LESEIARESG HGRPERGQGQ
201: IEEETKNLKA PLLEAQATKN KSKIPWTKLG VLVIVWASFF VIYLLRGNKD GKGIITIKPC GVEYWILLSL QIPLALIFTK LALSRTESRQ EQSPNDQKNQ
301: EGTRLDKSTR LKFPAMSFLA GLLGGIFGIG GGMLISPLLL QSGIPPQITA ATTSFMVFFS ATMSAVQYLL LGMQNTDTAY VFSFICFLAS LLGLVLVQKA
401: VAQFGRASII VFSVGTVMSL STVLMTSFGA LDVWTDYVAG KDMGFKLPC

Arabidopsis Description

Sulfite exporter TauE/SafE family protein 5 [Source:UniProtKB/Swiss-Prot;Acc:F4JIP9]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.