Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 7
- golgi 6
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr2P15100_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G61740.1 | GSMUA_Achr2P15100_001 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P00570_001 | Banana | plasma membrane | 62.82 | 37.34 |
| CDY25317 | Canola | plasma membrane | 38.27 | 35.1 |
| HORVU3Hr1G077570.1 | Barley | peroxisome | 36.46 | 30.61 |
| TraesCS3A01G324800.1 | Wheat | plasma membrane | 47.29 | 28.54 |
| TraesCS3D01G318100.1 | Wheat | plasma membrane | 47.29 | 27.87 |
| TraesCS3B01G353800.1 | Wheat | plasma membrane | 46.57 | 27.51 |
| Os01t0786700-00 | Rice | plasma membrane | 39.35 | 27.46 |
| Os01t0786800-01 | Rice | plasma membrane | 42.96 | 27.42 |
| EER96273 | Sorghum | plasma membrane | 41.16 | 26.39 |
| Bra013516.1-P | Field mustard | plasma membrane | 37.18 | 26.01 |
| TraesCS7D01G059100.1 | Wheat | plasma membrane, plastid | 40.43 | 25.99 |
| Zm00001d043240_P002 | Maize | plasma membrane | 42.6 | 25.71 |
| HORVU7Hr1G012180.2 | Barley | plastid | 39.71 | 25.4 |
| TraesCS7A01G064300.1 | Wheat | plasma membrane, plastid | 40.07 | 25.28 |
| KRH49901 | Soybean | plasma membrane | 41.52 | 24.31 |
| OQU87698 | Sorghum | plasma membrane | 45.49 | 24.09 |
| KRH41998 | Soybean | plasma membrane | 40.79 | 23.89 |
| KRH21651 | Soybean | plasma membrane | 40.43 | 23.78 |
| Bra027077.1-P | Field mustard | plasma membrane | 38.99 | 23.53 |
| CDY52324 | Canola | plasma membrane | 38.99 | 23.48 |
| Bra031401.1-P | Field mustard | plasma membrane | 38.99 | 23.48 |
| PGSC0003DMT400055932 | Potato | plasma membrane | 38.99 | 23.38 |
| Solyc02g079980.2.1 | Tomato | plasma membrane | 38.63 | 23.31 |
| CDY12912 | Canola | plasma membrane | 38.63 | 23.31 |
| AT4G21250.1 | Thale cress | plasma membrane | 37.55 | 23.16 |
| CDY61959 | Canola | plasma membrane | 38.27 | 23.09 |
| VIT_00s0532g00060.t01 | Wine grape | plasma membrane | 37.91 | 22.93 |
| AT1G11540.2 | Thale cress | plasma membrane | 37.18 | 22.89 |
| Solyc03g031530.2.1 | Tomato | plasma membrane | 37.55 | 22.86 |
| AT1G61740.1 | Thale cress | plasma membrane | 36.82 | 22.27 |
| CDX79051 | Canola | plasma membrane | 31.41 | 21.07 |
| CDX82815 | Canola | plasma membrane | 31.05 | 20.82 |
| AT4G21260.1 | Thale cress | plasma membrane | 27.8 | 19.59 |
| GSMUA_Achr6P31670_001 | Banana | plasma membrane | 21.3 | 15.4 |
| GSMUA_Achr6P05790_001 | Banana | plasma membrane | 24.91 | 14.56 |
| GSMUA_Achr10P... | Banana | plasma membrane | 24.91 | 14.53 |
| GSMUA_Achr7P24830_001 | Banana | golgi, plasma membrane, vacuole | 25.27 | 14.52 |
| GSMUA_Achr7P10890_001 | Banana | plasma membrane | 24.55 | 14.35 |
| GSMUA_Achr2P15360_001 | Banana | plasma membrane | 24.55 | 14.26 |
| GSMUA_AchrUn_... | Banana | plasma membrane | 22.74 | 13.29 |
| GSMUA_Achr4P15550_001 | Banana | plasma membrane | 21.66 | 12.66 |
| GSMUA_Achr3P30510_001 | Banana | plasma membrane | 22.02 | 12.47 |
| HORVU3Hr1G077530.9 | Barley | plasma membrane | 13.0 | 7.74 |
| TraesCS4A01G424800.1 | Wheat | plasma membrane | 3.25 | 4.35 |
| GSMUA_Achr4P33580_001 | Banana | golgi, plasma membrane, plastid | 1.81 | 2.53 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr4P33570_001 | EnsemblPlants:GSMUA_Achr4T33570_001 | EnsemblPlantsGene:GSMUA_Achr4G33570_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TM_pro_TauE-like | PANTHER:PTHR14255 | PANTHER:PTHR14255:SF10 | PFAM:PF01925 | SEG:seg | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0002951D01 | UniProt:M0SUB9 | MapMan:24.2.6.2 | : | : |
Description
membrane protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr4G33570_001]
Coordinates
chr4:+:29964576..29965409
Molecular Weight (calculated)
29797.6 Da
IEP (calculated)
5.619
GRAVY (calculated)
0.496
Length
277 amino acids
Sequence
(BLAST)
(BLAST)
001: MNDSLFLLQC VLLLLPLTVL TTTRLSVAGA TESTSQLHGI ELLLNLRDRW KESIQREASL GYHTIISCVL CFIAASVSSA GGVSGGSLFL PILNLVAGLD
101: LKVATTYSAF MVTGGSLANV LYNVILTNHG PEAAKKPLIN YDIALLSQPS MLAGVSLGVI CNIMFPEWLI VVLFAVFLAC STYRTCKAGL RCWNAETQEM
201: ERSDGCGWEG NGGAEGANGG VEEALLGGAP EGRMMRFPWE DTVVLAMVWA LFFLLHLLIG GKHGKVSLYL NIENLQK
101: LKVATTYSAF MVTGGSLANV LYNVILTNHG PEAAKKPLIN YDIALLSQPS MLAGVSLGVI CNIMFPEWLI VVLFAVFLAC STYRTCKAGL RCWNAETQEM
201: ERSDGCGWEG NGGAEGANGG VEEALLGGAP EGRMMRFPWE DTVVLAMVWA LFFLLHLLIG GKHGKVSLYL NIENLQK
001: MKTLFVLFLL LLCVFAINAN QEEENLPQSH HNLLHKVQQW RTSLKESSAA ELKLSSAIIM AGVLCFLAAL ISSAGGIGGG GLFIPIMTIV AGVDLKTASS
101: FSAFMVTGGS IANVISNLFG GKALLDYDLA LLLEPCMLLG VSIGVICNRV LPEWLITVLF AVFLAWSSLK TCRSGVKFWK LESEIARESG HGRPERGQGQ
201: IEEETKNLKA PLLEAQATKN KSKIPWTKLG VLVIVWASFF VIYLLRGNKD GKGIITIKPC GVEYWILLSL QIPLALIFTK LALSRTESRQ EQSPNDQKNQ
301: EGTRLDKSTR LKFPAMSFLA GLLGGIFGIG GGMLISPLLL QSGIPPQITA ATTSFMVFFS ATMSAVQYLL LGMQNTDTAY VFSFICFLAS LLGLVLVQKA
401: VAQFGRASII VFSVGTVMSL STVLMTSFGA LDVWTDYVAG KDMGFKLPC
101: FSAFMVTGGS IANVISNLFG GKALLDYDLA LLLEPCMLLG VSIGVICNRV LPEWLITVLF AVFLAWSSLK TCRSGVKFWK LESEIARESG HGRPERGQGQ
201: IEEETKNLKA PLLEAQATKN KSKIPWTKLG VLVIVWASFF VIYLLRGNKD GKGIITIKPC GVEYWILLSL QIPLALIFTK LALSRTESRQ EQSPNDQKNQ
301: EGTRLDKSTR LKFPAMSFLA GLLGGIFGIG GGMLISPLLL QSGIPPQITA ATTSFMVFFS ATMSAVQYLL LGMQNTDTAY VFSFICFLAS LLGLVLVQKA
401: VAQFGRASII VFSVGTVMSL STVLMTSFGA LDVWTDYVAG KDMGFKLPC
Arabidopsis Description
Sulfite exporter TauE/SafE family protein 5 [Source:UniProtKB/Swiss-Prot;Acc:F4JIP9]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.