Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G61740.1 | CDY03088 | AT2G01950.1 | 19000166 |
| AT1G61740.1 | CDY17621 | AT2G01950.1 | 19000166 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra031401.1-P | Field mustard | plasma membrane | 87.75 | 57.61 |
| CDY52324 | Canola | plasma membrane | 87.75 | 57.61 |
| CDY12912 | Canola | plasma membrane | 80.46 | 52.94 |
| CDY61959 | Canola | plasma membrane | 79.8 | 52.51 |
| AT1G61740.1 | Thale cress | plasma membrane | 79.14 | 52.18 |
| GSMUA_Achr4P33570_001 | Banana | extracellular, plasma membrane | 35.1 | 38.27 |
| KRH49901 | Soybean | plasma membrane | 50.0 | 31.92 |
| KRH21651 | Soybean | plasma membrane | 48.34 | 31.0 |
| KRH41998 | Soybean | plasma membrane | 48.34 | 30.87 |
| Solyc03g031530.2.1 | Tomato | plasma membrane | 46.03 | 30.55 |
| VIT_00s0532g00060.t01 | Wine grape | plasma membrane | 45.7 | 30.13 |
| Solyc02g079980.2.1 | Tomato | plasma membrane | 45.7 | 30.07 |
| PGSC0003DMT400055932 | Potato | plasma membrane | 45.36 | 29.65 |
| CDX79051 | Canola | plasma membrane | 39.07 | 28.57 |
| CDX82815 | Canola | plasma membrane | 39.07 | 28.57 |
| HORVU3Hr1G077570.1 | Barley | peroxisome | 30.13 | 27.58 |
| Os01t0786700-00 | Rice | plasma membrane | 34.44 | 26.2 |
| EER96273 | Sorghum | plasma membrane | 35.1 | 24.54 |
| GSMUA_Achr6P00570_001 | Banana | plasma membrane | 37.75 | 24.46 |
| TraesCS7D01G059100.1 | Wheat | plasma membrane, plastid | 33.44 | 23.43 |
| HORVU7Hr1G012180.2 | Barley | plastid | 33.44 | 23.33 |
| Os01t0786800-01 | Rice | plasma membrane | 33.44 | 23.27 |
| TraesCS7A01G064300.1 | Wheat | plasma membrane, plastid | 33.44 | 23.01 |
| Zm00001d043240_P002 | Maize | plasma membrane | 34.77 | 22.88 |
| TraesCS3A01G324800.1 | Wheat | plasma membrane | 34.11 | 22.44 |
| TraesCS3D01G318100.1 | Wheat | plasma membrane | 34.77 | 22.34 |
| TraesCS3B01G353800.1 | Wheat | plasma membrane | 34.11 | 21.96 |
| OQU87698 | Sorghum | plasma membrane | 35.1 | 20.27 |
| CDX83221 | Canola | plasma membrane | 24.17 | 15.8 |
| CDY70121 | Canola | plasma membrane | 24.17 | 15.77 |
| CDY35338 | Canola | plasma membrane | 23.84 | 15.32 |
| CDX77007 | Canola | plasma membrane | 23.84 | 15.32 |
| CDX75027 | Canola | plasma membrane | 21.85 | 14.38 |
| CDY33170 | Canola | plasma membrane | 21.52 | 14.13 |
| TraesCS4A01G424800.1 | Wheat | plasma membrane | 4.64 | 6.76 |
| GSMUA_Achr4P33580_001 | Banana | golgi, plasma membrane, plastid | 3.97 | 6.06 |
| HORVU3Hr1G077530.9 | Barley | plasma membrane | 8.61 | 5.59 |
Protein Annotations
| EnsemblPlants:CDY25317 | EnsemblPlantsGene:GSBRNA2T00029402001 | GO:A0A078GJF6 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:TM_pro_TauE-like | PANTHER:PTHR14255 | PANTHER:PTHR14255:SF10 | PFAM:PF01925 | ProteinID:CDY25317 | ProteinID:CDY25317.1 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | UniParc:UPI0004EEF688 | UniProt:A0A078GJF6 | MapMan:24.2.6.2 |
Description
BnaC01g29860DBnaC01g29860D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GJF6]
Coordinates
chrLK032173:-:177666..179456
Molecular Weight (calculated)
33889.5 Da
IEP (calculated)
8.777
GRAVY (calculated)
0.348
Length
302 amino acids
Sequence
(BLAST)
(BLAST)
001: MRNYFVPVTL SFLTIIILLT PSTAEQEPSF LFPVDQLLNK TSSWLDFPTK FNQPKIELTT STIIAAVLSF IAASISSAGG IGGGGLYVPI MTIVAGLDLK
101: TASSFSAFMV TGGSIANVGC NLFVRNPKAG GKTMIDFDLA LLLEPCMLLG VSVGVICNLV FPNWLITSLF AVFLAWSTVK TFGNGVYYWR LESEMVKIRE
201: SRRVGENDEN EIESVKLPLL GDYERPKRFP WVKLGVLVII WLSYFAVYLL RGNKYGERWR TCSREDRSSS IMVSRFWSCL EESPCLFFLR SSSRFLHFLR
301: FP
101: TASSFSAFMV TGGSIANVGC NLFVRNPKAG GKTMIDFDLA LLLEPCMLLG VSVGVICNLV FPNWLITSLF AVFLAWSTVK TFGNGVYYWR LESEMVKIRE
201: SRRVGENDEN EIESVKLPLL GDYERPKRFP WVKLGVLVII WLSYFAVYLL RGNKYGERWR TCSREDRSSS IMVSRFWSCL EESPCLFFLR SSSRFLHFLR
301: FP
001: MRNNFVPIIL SFIIFLTPSI AEQEPSILSP VDQLLNKTSS YLDFSTKFNQ PRIELTTSTI IAGLLSFLAS SISSAGGIGG GGLYVPIMTI VAGLDLKTAS
101: SFSAFMVTGG SIANVGCNLF VRNPKSGGKT LIDFDLALLL EPCMLLGVSI GVICNLVFPN WLITSLFAVF LAWSTLKTFG NGLYYWRLES EMVKIRESNR
201: IEEDDEEDKI ESLKLPLLED YQRPKRFPWI KLGVLVIIWL SYFAVYLLRG NKYGEGIISI EPCGNAYWLI SSSQIPLTLF FTLWICFSDN VQSQQQSDYH
301: VSVKDVEDLR SNDGARSNKC MFPVMALLAG VLGGVFGIGG GMLISPLLLQ VGIAPEVTAA TCSFMVLFSS TMSAIQYLLL GMEHTGTASI FAVICFVASL
401: VGLKVVQKVI TEYGRASIIV FSVGIVMALS IVLMTSYGAL DVWNDYVSGR YMGFKLPC
101: SFSAFMVTGG SIANVGCNLF VRNPKSGGKT LIDFDLALLL EPCMLLGVSI GVICNLVFPN WLITSLFAVF LAWSTLKTFG NGLYYWRLES EMVKIRESNR
201: IEEDDEEDKI ESLKLPLLED YQRPKRFPWI KLGVLVIIWL SYFAVYLLRG NKYGEGIISI EPCGNAYWLI SSSQIPLTLF FTLWICFSDN VQSQQQSDYH
301: VSVKDVEDLR SNDGARSNKC MFPVMALLAG VLGGVFGIGG GMLISPLLLQ VGIAPEVTAA TCSFMVLFSS TMSAIQYLLL GMEHTGTASI FAVICFVASL
401: VGLKVVQKVI TEYGRASIIV FSVGIVMALS IVLMTSYGAL DVWNDYVSGR YMGFKLPC
Arabidopsis Description
Sulfite exporter TauE/SafE family protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9SYB0]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.