Subcellular Localization
min:
: max
Winner_takes_all: plastid, extracellular
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- mitochondrion 2
- nucleus 1
- extracellular 3
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| AT5G23540.1 | Thale cress | cytosol | 40.16 | 15.91 |
| TraesCS7B01G316000.1 | Wheat | cytosol | 39.34 | 15.53 |
| TraesCS7D01G409200.1 | Wheat | cytosol | 39.34 | 15.53 |
| Os06t0703600-01 | Rice | cytosol | 38.52 | 15.26 |
| TraesCS7A01G416000.1 | Wheat | cytosol | 38.52 | 15.21 |
| HORVU7Hr1G096410.6 | Barley | cytosol, plastid | 36.89 | 13.51 |
| AT1G22920.1 | Thale cress | cytosol | 27.87 | 9.52 |
| AT1G71230.1 | Thale cress | cytosol | 27.87 | 9.5 |
Protein Annotations
| EntrezGene:28721203 | Gene3D:3.40.140.10 | MapMan:35.1 | UniProt:A0A1P8BGX5 | ProteinID:ANM70797.1 | ArrayExpress:AT5G27607 |
| EnsemblPlantsGene:AT5G27607 | EnsemblPlants:AT5G27607.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006508 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008233 | GO:GO:0016787 | GO:GO:0019538 |
| InterPro:JAMM/MPN+_dom | RefSeq:NP_001332378.1 | PFAM:PF01398 | PANTHER:PTHR10410 | PANTHER:PTHR10410:SF5 | SUPFAM:SSF102712 |
| UniParc:UPI0008491345 | SEG:seg | : | : | : | : |
Description
JAB1/Mov34/MPN/PAD-1 ubiquitin protease [Source:UniProtKB/TrEMBL;Acc:A0A1P8BGX5]
Coordinates
chr5:+:9760593..9762087
Molecular Weight (calculated)
13992.1 Da
IEP (calculated)
10.441
GRAVY (calculated)
-0.007
Length
122 amino acids
Sequence
(BLAST)
(BLAST)
001: MSIKVRSKFL MPPQLPLYCP SYSVSVFRAV LLMKSHRNFL SYSSASSSKE SLVLSTSYMA LPRSLAFFPF SMILLRLRPE MVVGWYHSHP GFGFWRSGVD
101: INTQHSFEPL NQRAVAQLKE NE
101: INTQHSFEPL NQRAVAQLKE NE
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.