Factsheet for TraesCS7D01G409200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G316000.1	Wheat	cytosol	96.44	96.44
TraesCS7A01G416000.1	Wheat	cytosol	94.17	94.17
Os06t0703600-01	Rice	cytosol	72.49	72.73
HORVU7Hr1G096410.6	Barley	cytosol, plastid	76.38	70.87
KRH21194	Soybean	cytosol, nucleus	65.05	65.05
VIT_18s0001g10820.t01	Wine grape	cytosol	64.72	64.72
CDY59032	Canola	cytosol	49.19	64.68
KRH11080	Soybean	cytosol	64.4	64.4
Bra009693.1-P	Field mustard	cytosol	64.08	64.29
CDY16857	Canola	cytosol	64.08	64.29
CDX88035	Canola	cytosol	64.08	64.29
CDX87167	Canola	cytosol	64.08	64.29
CDX80372	Canola	extracellular	64.08	64.29
Bra026492.1-P	Field mustard	cytosol	64.08	64.29
KRH05705	Soybean	cytosol, nucleus	64.72	64.1
CDY46961	Canola	cytosol	63.75	63.96
TraesCS1D01G235300.1	Wheat	cytosol	63.75	63.96
PGSC0003DMT400020708	Potato	cytosol	64.4	63.78
CDY40791	Canola	cytosol	63.43	63.64
TraesCS3D01G187900.1	Wheat	cytosol	63.11	63.52
Solyc04g079200.2.1	Tomato	nucleus	64.08	63.46
KRH15339	Soybean	nucleus	64.4	62.97
Bra029375.1-P	Field mustard	cytosol	50.16	62.25
AT5G27607.1	Thale cress	extracellular, plastid	15.53	39.34
TraesCS2D01G505300.1	Wheat	golgi, unclear	28.16	23.9

Protein Annotations

MapMan:19.2.6.2.2.10	Gene3D:3.40.140.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0061578	InterPro:IPR037518	InterPro:JAMM/MPN+_dom	InterPro:MPN	PFAM:PF01398	PFscan:PS50249
InterPro:PSMD14	PANTHER:PTHR10410	PANTHER:PTHR10410:SF13	SMART:SM00232	SUPFAM:SSF102712	EnsemblPlantsGene:TraesCS7D01G409200
EnsemblPlants:TraesCS7D01G409200.1	TIGR:cd08069	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7D:+:528042934..528043942

Molecular Weight (calculated)

33653.5 Da

IEP (calculated)

5.036

GRAVY (calculated)

-0.129

Length

309 amino acids

Sequence
(BLAST)

001: MDDNMLAGLL AGAGLPARPP GGDTPLPDSS EQIYIAPVAL LKMLKHARAG VPMEVMGLML GEFVDEYTVT VVDVFAMPQS GTGVSVESVD HAFQTNMMDM
101: LRQTGRPEMV VGWYHSHPGF GCWLSGTDVQ TQLSFEQLNP RAVAVVLDPI QSVRGKVVMD AFRLINPAAM LTGHEPRQTT SNVGGTVRPS LEARVHGLGV
201: HYYSLAIGHR QNEVEERMLA CLNRKRWSDG LVLQRFDDDE NAGAVSGIRD LAVQYDAQVR EEDVTPPERL AVVRAGRPDA KKQLGERAEA AMSGNIVQTL
301: GMMLDTVTF

Best Arabidopsis Sequence Match ( AT5G23540.1 )
(BLAST)

001: MERLQRIFGA GGGLGHASPD SPTLDTSEQV YISSLALLKM LKHGRAGVPM EVMGLMLGEF VDEYTVRVVD VFAMPQSGTG VSVEAVDHVF QTNMLDMLKQ
101: TGRPEMVVGW YHSHPGFGCW LSGVDINTQQ SFEALNQRAV AVVVDPIQSV KGKVVIDAFR SINPQTIMLG QEPRQTTSNL GHLNKPSIQA LIHGLNRHYY
201: SIAINYRKNE LEEKMLLNLH KKKWTDGLTL RRFDTHSKTN EQTVQEMLSL AAKYNKAVQE EDELSPEKLA IVNVGRQDAK KHLEEHVSNL MSSNIVQTLG
301: TMLDTVVF

Arabidopsis Description

RPN1126S proteasome non-ATPase regulatory subunit 14 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LT08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.