Factsheet for HORVU7Hr1G096410.6

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

plastid 2
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
TargetP:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G409200.1	Wheat	cytosol	70.87	76.38
TraesCS7A01G416000.1	Wheat	cytosol	70.57	76.05
TraesCS7B01G316000.1	Wheat	cytosol	69.37	74.76
Os06t0703600-01	Rice	cytosol	59.16	63.96
CDY59032	Canola	cytosol	44.44	62.98
Bra009693.1-P	Field mustard	cytosol	54.05	58.44
Bra026492.1-P	Field mustard	cytosol	54.05	58.44
CDX80372	Canola	extracellular	54.05	58.44
CDX87167	Canola	cytosol	54.05	58.44
CDX88035	Canola	cytosol	54.05	58.44
CDY16857	Canola	cytosol	54.05	58.44
CDY40791	Canola	cytosol	54.05	58.44
CDY46961	Canola	cytosol	54.05	58.44
KRH21194	Soybean	cytosol, nucleus	53.75	57.93
VIT_18s0001g10820.t01	Wine grape	cytosol	53.15	57.28
KRH11080	Soybean	cytosol	53.15	57.28
KRH05705	Soybean	cytosol, nucleus	53.45	57.05
PGSC0003DMT400020708	Potato	cytosol	52.85	56.41
Solyc04g079200.2.1	Tomato	nucleus	52.55	56.09
Bra029375.1-P	Field mustard	cytosol	41.74	55.82
KRH15339	Soybean	nucleus	52.85	55.7
HORVU1Hr1G058180.1	Barley	plastid	52.55	49.86
HORVU3Hr1G037790.1	Barley	nucleus, plastid	53.15	48.9
AT5G27607.1	Thale cress	extracellular, plastid	13.51	36.89
HORVU0Hr1G018470.1	Barley	cytosol	21.62	29.63
HORVU6Hr1G023630.1	Barley	cytosol	20.72	28.75
HORVU3Hr1G054660.1	Barley	cytosol	21.02	28.69
HORVU3Hr1G021300.1	Barley	cytosol, plastid	13.21	26.67
HORVU0Hr1G025410.1	Barley	cytosol	21.32	23.59
HORVU4Hr1G048730.1	Barley	cytosol	21.32	23.51
HORVU1Hr1G017260.3	Barley	cytosol	7.81	23.01
HORVU7Hr1G078010.1	Barley	cytosol	8.71	21.32
HORVU6Hr1G058050.2	Barley	cytosol	10.81	20.81
HORVU3Hr1G113750.1	Barley	cytosol	9.31	20.0
HORVU2Hr1G112000.1	Barley	cytosol	22.52	18.84
HORVU2Hr1G067660.1	Barley	cytosol, peroxisome	3.9	18.57
HORVU1Hr1G008160.1	Barley	cytosol	8.41	18.42
HORVU2Hr1G056160.5	Barley	cytosol	8.71	17.26
HORVU4Hr1G047410.2	Barley	cytosol, mitochondrion, peroxisome	12.01	15.81

Protein Annotations

EnsemblPlants:HORVU7Hr1G096410.6	EnsemblPlantsGene:HORVU7Hr1G096410	Gene3D:3.40.140.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR037518	InterPro:JAMM/MPN+_dom	InterPro:MPN	PANTHER:PTHR10410	PANTHER:PTHR10410:SF5	PFAM:PF01398
PFscan:PS50249	SEG:seg	SMART:SM00232	SUPFAM:SSF102712	UniParc:UPI000B460B33	UniProt:A0A287XGE0
MapMan:19.2.6.2.2.10	:	:	:	:	:

Description

No Description!

Coordinates

chrchr7H:-:587930758..587932147

Molecular Weight (calculated)

36661.8 Da

IEP (calculated)

8.378

GRAVY (calculated)

-0.321

Length

333 amino acids

Sequence
(BLAST)

001: NFLGPGRPDR YANATCTIRS SSRARQPADP WTTTCLLASP RCRRPPTRRS PTRRSRSTSP PSRSSRCSRT ARAGVPMEVM GLMLGEFVDE YTVTVVDVFA
101: MPQSGTGVSV EAVDDAFQTG MMGMLRQTGR PEMVVGWYHS HPGFGCWLSA TDIQTQLSFE QLNPRAVAVV LDPIQSVRGK VVMDAFRLIN PTAILMRQEP
201: RQTTSNVGAT VRPSLDARIQ GLGVHYYSLV IGHRQNEVEE GMLACLNRSR WSHGLVLPSF DDDENEAAVS GIRDLAVQYD VQVREEDATQ PERLAVVRAG
301: RPDAKKQLGE RAEAAMSGNI VHTLGMMLDT VAF

Best Arabidopsis Sequence Match ( AT5G23540.1 )
(BLAST)

001: MERLQRIFGA GGGLGHASPD SPTLDTSEQV YISSLALLKM LKHGRAGVPM EVMGLMLGEF VDEYTVRVVD VFAMPQSGTG VSVEAVDHVF QTNMLDMLKQ
101: TGRPEMVVGW YHSHPGFGCW LSGVDINTQQ SFEALNQRAV AVVVDPIQSV KGKVVIDAFR SINPQTIMLG QEPRQTTSNL GHLNKPSIQA LIHGLNRHYY
201: SIAINYRKNE LEEKMLLNLH KKKWTDGLTL RRFDTHSKTN EQTVQEMLSL AAKYNKAVQE EDELSPEKLA IVNVGRQDAK KHLEEHVSNL MSSNIVQTLG
301: TMLDTVVF

Arabidopsis Description

RPN1126S proteasome non-ATPase regulatory subunit 14 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LT08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.