Factsheet for HORVU3Hr1G037790.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 2
mitochondrion 1
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	mitochondrion, nucleus, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G187900.1	Wheat	cytosol	84.81	100.0
TraesCS3B01G213500.1	Wheat	cytosol	84.81	100.0
TraesCS3A01G183700.1	Wheat	cytosol	84.81	100.0
EES00543	Sorghum	cytosol	82.87	97.72
Zm00001d040334_P001	Maize	cytosol	82.87	97.72
Zm00001d008284_P004	Maize	cytosol	82.87	97.72
Os01t0267200-01	Rice	plasma membrane, plastid	82.87	97.72
GSMUA_Achr9P03520_001	Banana	unclear	80.11	94.16
GSMUA_Achr6P33940_001	Banana	cytosol	80.11	93.25
Zm00001d035432_P001	Maize	peroxisome	38.95	87.58
HORVU1Hr1G058180.1	Barley	plastid	83.98	86.61
Zm00001d052648_P001	Maize	cytosol, nucleus, peroxisome	34.25	85.52
HORVU7Hr1G096410.6	Barley	cytosol, plastid	48.9	53.15
Zm00001d013752_P001	Maize	cytosol	52.76	49.87
HORVU6Hr1G023630.1	Barley	cytosol	21.27	32.08
HORVU3Hr1G054660.1	Barley	cytosol	21.55	31.97
HORVU0Hr1G018470.1	Barley	cytosol	21.27	31.69
HORVU3Hr1G021300.1	Barley	cytosol, plastid	14.36	31.52
HORVU2Hr1G067660.1	Barley	cytosol, peroxisome	5.52	28.57
HORVU1Hr1G017260.3	Barley	cytosol	8.84	28.32
HORVU6Hr1G058050.2	Barley	cytosol	12.98	27.17
HORVU0Hr1G025410.1	Barley	cytosol	22.38	26.91
HORVU4Hr1G048730.1	Barley	cytosol	22.38	26.82
HORVU7Hr1G078010.1	Barley	cytosol	8.84	23.53
HORVU2Hr1G112000.1	Barley	cytosol	24.31	22.11
HORVU1Hr1G008160.1	Barley	cytosol	9.12	21.71
HORVU3Hr1G113750.1	Barley	cytosol	9.12	21.29
HORVU2Hr1G056160.5	Barley	cytosol	8.84	19.05
HORVU4Hr1G047410.2	Barley	cytosol, mitochondrion, peroxisome	12.15	17.39

Protein Annotations

MapMan:19.2.6.2.2.10	Gene3D:3.40.140.10	UniProt:A0A287KSV7	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488
GO:GO:0005515	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787
GO:GO:0019538	GO:GO:0061578	GO:GO:0070536	EnsemblPlantsGene:HORVU3Hr1G037790	EnsemblPlants:HORVU3Hr1G037790.1	InterPro:IPR037518
InterPro:JAMM/MPN+_dom	InterPro:MPN	PFAM:PF01398	PFAM:PF13012	PFscan:PS50249	InterPro:PSMD14
PANTHER:PTHR10410	PANTHER:PTHR10410:SF13	InterPro:Rpn11/EIF3F_C	SMART:SM00232	SUPFAM:SSF102712	UniParc:UPI000B462F5B
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr3H:+:215659592..215662671

Molecular Weight (calculated)

40834.4 Da

IEP (calculated)

10.140

GRAVY (calculated)

-0.507

Length

362 amino acids

Sequence
(BLAST)

001: KKNNNRVLAS CTRRKKSRDP GRSRSRKQQP QRRKRRRLSQ APPSSRNQIE QPREAMERLQ RIFGAGGMGQ PPSDSPLLDS SEQVYISSLA LLKMLKHGRA
101: GVPMEVMGLM LGEFVDDYTV RVVDVFAMPQ SGTGVSVEAV DHVFQTNMLD MLKQTGRPEM VVGWYHSHPG FGCWLSGVDI NTQQSFEALN PRAVAVVIDP
201: IQSVKGKVVI DAFRLINPQT MMLGQEPRQT TSNVGHLNKP SIQALIHGLN RHYYSIAINY RKNELEEKML LNLHKKKWTD GLILKKFDAH SETNEQTVQE
301: MLSLAIKYNK AVQEEDELSP EKLAIANVGR QDAKKHLEEH VSNLMSSNIV QTLGTMLDTV VF

Best Arabidopsis Sequence Match ( AT5G23540.1 )
(BLAST)

001: MERLQRIFGA GGGLGHASPD SPTLDTSEQV YISSLALLKM LKHGRAGVPM EVMGLMLGEF VDEYTVRVVD VFAMPQSGTG VSVEAVDHVF QTNMLDMLKQ
101: TGRPEMVVGW YHSHPGFGCW LSGVDINTQQ SFEALNQRAV AVVVDPIQSV KGKVVIDAFR SINPQTIMLG QEPRQTTSNL GHLNKPSIQA LIHGLNRHYY
201: SIAINYRKNE LEEKMLLNLH KKKWTDGLTL RRFDTHSKTN EQTVQEMLSL AAKYNKAVQE EDELSPEKLA IVNVGRQDAK KHLEEHVSNL MSSNIVQTLG
301: TMLDTVVF

Arabidopsis Description

RPN1126S proteasome non-ATPase regulatory subunit 14 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LT08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.