Factsheet for Zm00001d008284_P004

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES00543	Sorghum	cytosol	100.0	100.0
Zm00001d040334_P001	Maize	cytosol	100.0	100.0
Os01t0267200-01	Rice	plasma membrane, plastid	99.67	99.67
TraesCS3A01G183700.1	Wheat	cytosol	97.72	97.72
TraesCS3B01G213500.1	Wheat	cytosol	97.72	97.72
TraesCS3D01G187900.1	Wheat	cytosol	97.72	97.72
GSMUA_Achr9P03520_001	Banana	unclear	95.11	94.81
GSMUA_Achr6P33940_001	Banana	cytosol	95.44	94.21
Zm00001d035432_P001	Maize	peroxisome	47.56	90.68
Zm00001d052648_P001	Maize	cytosol, nucleus, peroxisome	42.02	88.97
HORVU3Hr1G037790.1	Barley	nucleus, plastid	97.72	82.87
Zm00001d013752_P001	Maize	cytosol	63.84	51.17
Zm00001d002027_P002	Maize	extracellular	29.32	24.86

Protein Annotations

EntrezGene:100217166	EntrezGene:103649975	MapMan:19.2.6.2.2.10	Gene3D:3.40.140.10	ProteinID:AQK89375.1	ProteinID:AQK89380.1
UniProt:B4FLQ8	EMBL:BT038046	EMBL:BT043034	EMBL:BT067392	EMBL:EU952807	EMBL:EU961848
GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987
GO:GO:0016787	GO:GO:0019538	GO:GO:0061578	GO:GO:0070536	InterPro:IPR037518	InterPro:JAMM/MPN+_dom
MEROPS:M67.001	InterPro:MPN	ProteinID:ONM31179.1	ProteinID:ONM31180.1	PFAM:PF01398	PFAM:PF13012
PFscan:PS50249	InterPro:PSMD14	PANTHER:PTHR10410	PANTHER:PTHR10410:SF13	InterPro:Rpn11/EIF3F_C	SMART:SM00232
SUPFAM:SSF102712	UniParc:UPI00017B6B42	EnsemblPlantsGene:Zm00001d008284	EnsemblPlants:Zm00001d008284_P004	EnsemblPlants:Zm00001d008284_T004	SEG:seg

Description

26S proteasome non-ATPase regulatory subunit 14 homolog

Coordinates

chr8:-:3994584..3997971

Molecular Weight (calculated)

34409.8 Da

IEP (calculated)

6.748

GRAVY (calculated)

-0.223

Length

307 amino acids

Sequence
(BLAST)

001: MERLQRIFGA SGMGQPPTDS PLLDSSEQVY ISSLALLKML KHGRAGVPME VMGLMLGEFV DDYTVRVVDV FAMPQSGTGV SVEAVDHVFQ TNMLDMLKQT
101: GRPEMVVGWY HSHPGFGCWL SGVDINTQQS FEALNPRAVA VVIDPIQSVK GKVVIDAFRL INPQTMMLGQ EPRQTTSNVG HLNKPSIQAL IHGLNRHYYS
201: IAINYRKNEL EEKMLLNLHK KKWTDGLILK RFDTHSKTNE QTVQEMLNLA IKYNKAVQEE DELPPEKLAI ANVGRQDAKK HLEEHVSNLM SSNIVQTLGT
301: MLDTVVF

Best Arabidopsis Sequence Match ( AT5G23540.1 )
(BLAST)

001: MERLQRIFGA GGGLGHASPD SPTLDTSEQV YISSLALLKM LKHGRAGVPM EVMGLMLGEF VDEYTVRVVD VFAMPQSGTG VSVEAVDHVF QTNMLDMLKQ
101: TGRPEMVVGW YHSHPGFGCW LSGVDINTQQ SFEALNQRAV AVVVDPIQSV KGKVVIDAFR SINPQTIMLG QEPRQTTSNL GHLNKPSIQA LIHGLNRHYY
201: SIAINYRKNE LEEKMLLNLH KKKWTDGLTL RRFDTHSKTN EQTVQEMLSL AAKYNKAVQE EDELSPEKLA IVNVGRQDAK KHLEEHVSNL MSSNIVQTLG
301: TMLDTVVF

Arabidopsis Description

RPN1126S proteasome non-ATPase regulatory subunit 14 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LT08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.