Factsheet for GSMUA_Achr6P33940_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr9P03520_001	Banana	unclear	98.71	99.68
EES00543	Sorghum	cytosol	94.21	95.44
Zm00001d040334_P001	Maize	cytosol	94.21	95.44
Os01t0267200-01	Rice	plasma membrane, plastid	94.21	95.44
Zm00001d008284_P004	Maize	cytosol	94.21	95.44
Os05t0371200-01	Rice	cytosol	93.89	95.11
TraesCS1D01G235300.1	Wheat	cytosol	93.57	94.48
TraesCS3A01G183700.1	Wheat	cytosol	93.25	94.46
TraesCS3B01G213500.1	Wheat	cytosol	93.25	94.46
TraesCS3D01G187900.1	Wheat	cytosol	93.25	94.46
TraesCS1A01G237100.2	Wheat	cytosol	89.07	89.07
Zm00001d035432_P001	Maize	peroxisome	45.02	86.96
Zm00001d052648_P001	Maize	cytosol, nucleus, peroxisome	39.87	85.52
HORVU1Hr1G058180.1	Barley	plastid	93.57	82.91
HORVU3Hr1G037790.1	Barley	nucleus, plastid	93.25	80.11
Zm00001d013752_P001	Maize	cytosol	61.74	50.13
GSMUA_Achr10P...	Banana	cytosol	27.97	23.64

Protein Annotations

MapMan:19.2.6.2.2.10	Gene3D:3.40.140.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0061578	GO:GO:0070536	EnsemblPlantsGene:GSMUA_Achr6G33940_001	EnsemblPlants:GSMUA_Achr6P33940_001	EnsemblPlants:GSMUA_Achr6T33940_001	InterPro:IPR037518
InterPro:JAMM/MPN+_dom	UniProt:M0TCI7	InterPro:MPN	PFAM:PF01398	PFAM:PF13012	PFscan:PS50249
InterPro:PSMD14	PANTHER:PTHR10410	PANTHER:PTHR10410:SF13	InterPro:Rpn11/EIF3F_C	SMART:SM00232	SUPFAM:SSF102712
UniParc:UPI000296F756	SEG:seg	:	:	:	:

Description

26S proteasome non-ATPase regulatory subunit 14 [Source:GMGC_GENE;Acc:GSMUA_Achr6G33940_001]

Coordinates

chr6:-:32836969..32841371

Molecular Weight (calculated)

34826.3 Da

IEP (calculated)

6.577

GRAVY (calculated)

-0.225

Length

311 amino acids

Sequence
(BLAST)

001: MQGMERLHRI FSGAGGMGHP PTDSPQLDSA EQVYISSLAL LKMLKHGRAG VPMEVMGLML GEFVDEYTVR VVDVFAMPQS GTGVSVEAVD HVFQTNMLDM
101: LKQTGRPEMV VGWYHSHPGF GCWLSGVDIN TQQSFEALNP RAIAVVVDPI QSVKGKVVID AFRLINPQTM MLGQEPRQTT SNVGHLNKPS IQALIHGLNR
201: HYYSIAINYR KNELEEKMLL NLHKKKWTDG LILRPFDTHS KTNEQTVQEM LDLAIKYNKA VQEEDELPPE KLAIVNVGRQ DAKKHLEEHV SNLMSSNIIQ
301: TLGTMLDTVV F

Best Arabidopsis Sequence Match ( AT5G23540.1 )
(BLAST)

001: MERLQRIFGA GGGLGHASPD SPTLDTSEQV YISSLALLKM LKHGRAGVPM EVMGLMLGEF VDEYTVRVVD VFAMPQSGTG VSVEAVDHVF QTNMLDMLKQ
101: TGRPEMVVGW YHSHPGFGCW LSGVDINTQQ SFEALNQRAV AVVVDPIQSV KGKVVIDAFR SINPQTIMLG QEPRQTTSNL GHLNKPSIQA LIHGLNRHYY
201: SIAINYRKNE LEEKMLLNLH KKKWTDGLTL RRFDTHSKTN EQTVQEMLSL AAKYNKAVQE EDELSPEKLA IVNVGRQDAK KHLEEHVSNL MSSNIVQTLG
301: TMLDTVVF

Arabidopsis Description

RPN1126S proteasome non-ATPase regulatory subunit 14 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LT08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.