Factsheet for HORVU1Hr1G058180.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
cytosol 4
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G235300.1	Wheat	cytosol	87.18	99.35
Os05t0371200-01	Rice	cytosol	85.47	97.72
GSMUA_Achr9P03520_001	Banana	unclear	82.62	94.16
GSMUA_Achr6P33940_001	Banana	cytosol	82.91	93.57
TraesCS1A01G237100.2	Wheat	cytosol	82.62	93.25
HORVU3Hr1G037790.1	Barley	nucleus, plastid	86.61	83.98
HORVU7Hr1G096410.6	Barley	cytosol, plastid	49.86	52.55
HORVU6Hr1G023630.1	Barley	cytosol	21.94	32.08
HORVU3Hr1G054660.1	Barley	cytosol	22.22	31.97
HORVU0Hr1G018470.1	Barley	cytosol	21.94	31.69
HORVU3Hr1G021300.1	Barley	cytosol, plastid	14.53	30.91
HORVU2Hr1G067660.1	Barley	cytosol, peroxisome	5.98	30.0
HORVU1Hr1G017260.3	Barley	cytosol	9.12	28.32
HORVU0Hr1G025410.1	Barley	cytosol	23.93	27.91
HORVU4Hr1G048730.1	Barley	cytosol	23.93	27.81
HORVU6Hr1G058050.2	Barley	cytosol	13.68	27.75
HORVU7Hr1G078010.1	Barley	cytosol	9.12	23.53
HORVU2Hr1G112000.1	Barley	cytosol	25.07	22.11
HORVU1Hr1G008160.1	Barley	cytosol	9.4	21.71
HORVU3Hr1G113750.1	Barley	cytosol	9.4	21.29
HORVU2Hr1G056160.5	Barley	cytosol	9.12	19.05
HORVU4Hr1G047410.2	Barley	cytosol, mitochondrion, peroxisome	11.68	16.21

Protein Annotations

MapMan:19.2.6.2.2.10	Gene3D:3.40.140.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0061578	GO:GO:0070536	EnsemblPlantsGene:HORVU1Hr1G058180	EnsemblPlants:HORVU1Hr1G058180.1	InterPro:IPR037518	InterPro:JAMM/MPN+_dom
UniProt:M0VU98	InterPro:MPN	PFAM:PF01398	PFAM:PF13012	PFscan:PS50249	InterPro:PSMD14
PANTHER:PTHR10410	PANTHER:PTHR10410:SF13	InterPro:Rpn11/EIF3F_C	SMART:SM00232	SUPFAM:SSF102712	UniParc:UPI0002959704
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chrchr1H:-:424601544..424604152

Molecular Weight (calculated)

38959.3 Da

IEP (calculated)

7.800

GRAVY (calculated)

-0.229

Length

351 amino acids

Sequence
(BLAST)

001: MYSPLSVSLT KTELIGSPTR LCEATAARSK GGGAIRRRRP AEAMERLQRI FSGATGMGQP GTDSPLLDSS EQVYISSLAL LKMLKHGRAG VPMEVMGLML
101: GEFVDDYTVR VVDVFAMPQS GTGVSVEAVD HVFQTNMLDM LKQTGRPEMV VGWYHSHPGF GCWLSGVDIN TQQSFEALNP RAVAVVIDPI QSVKGKVVID
201: AFRLINPQTM MLGQEPRQTT SNVGHLNKPS IQALIHGLNR HYYSIAINYR KNELEEKMLL NLHKKKWTDG LIIKKFDTHS KTNEETVQEM LSLAIKYNKA
301: VQEEDELPPE KLAIANVGRQ DAKKHLEEHV SNLMSSNIVQ TLGTMLDTVV F

Best Arabidopsis Sequence Match ( AT5G23540.1 )
(BLAST)

001: MERLQRIFGA GGGLGHASPD SPTLDTSEQV YISSLALLKM LKHGRAGVPM EVMGLMLGEF VDEYTVRVVD VFAMPQSGTG VSVEAVDHVF QTNMLDMLKQ
101: TGRPEMVVGW YHSHPGFGCW LSGVDINTQQ SFEALNQRAV AVVVDPIQSV KGKVVIDAFR SINPQTIMLG QEPRQTTSNL GHLNKPSIQA LIHGLNRHYY
201: SIAINYRKNE LEEKMLLNLH KKKWTDGLTL RRFDTHSKTN EQTVQEMLSL AAKYNKAVQE EDELSPEKLA IVNVGRQDAK KHLEEHVSNL MSSNIVQTLG
301: TMLDTVVF

Arabidopsis Description

RPN1126S proteasome non-ATPase regulatory subunit 14 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LT08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.