Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G235300.1 | Wheat | cytosol | 93.89 | 94.81 |
| Os05t0371200-01 | Rice | cytosol | 92.28 | 93.49 |
| TraesCS3A01G183700.1 | Wheat | cytosol | 91.96 | 93.16 |
| GSMUA_Achr9P03520_001 | Banana | unclear | 89.07 | 89.94 |
| GSMUA_Achr6P33940_001 | Banana | cytosol | 89.07 | 89.07 |
| HORVU1Hr1G058180.1 | Barley | plastid | 93.25 | 82.62 |
| TraesCS7A01G416000.1 | Wheat | cytosol | 60.45 | 60.84 |
| TraesCS2A01G504600.1 | Wheat | cytosol | 26.37 | 22.53 |
Protein Annotations
| MapMan:19.2.6.2.2.10 | Gene3D:3.40.140.10 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0006464 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 |
| GO:GO:0061578 | InterPro:IPR037518 | InterPro:JAMM/MPN+_dom | InterPro:MPN | PFAM:PF01398 | PFAM:PF13012 |
| PFscan:PS50249 | InterPro:PSMD14 | PANTHER:PTHR10410 | PANTHER:PTHR10410:SF13 | InterPro:Rpn11/EIF3F_C | SMART:SM00232 |
| SUPFAM:SSF102712 | EnsemblPlantsGene:TraesCS1A01G237100 | EnsemblPlants:TraesCS1A01G237100.2 | TIGR:cd08069 | SEG:seg | : |
Description
No Description!
Coordinates
chr1A:-:420394759..420397117
Molecular Weight (calculated)
34556.6 Da
IEP (calculated)
6.441
GRAVY (calculated)
-0.283
Length
311 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLQRIFSG ATGMGQPESD SPLLDSSEQA SARHGSRSVS RAAADAGRVG VPMEVMGLML GEFVDDYTVR VVDVFAMPQS GTGVSVEAVD HVFQTNMLDM
101: LKQTGRPEMV VGWYHSHPGF GCWLSGVDIN TQQSFEALNP RAVAVVIDPI QSVKGKVVID AFRLINPQTM MLGQEPRQTT SNVGHLNKPS IQALIHGLNR
201: HYYSIAINYR KNELEEKMLL NLHKKKWTDG LILKKFDTHS KTNEETVQEM LSLAIKYNKA VQEEDELPPE KLAIANVGRQ DAKKHLEEHV SNLMSSNIVQ
301: TLGTMLDTVV F
101: LKQTGRPEMV VGWYHSHPGF GCWLSGVDIN TQQSFEALNP RAVAVVIDPI QSVKGKVVID AFRLINPQTM MLGQEPRQTT SNVGHLNKPS IQALIHGLNR
201: HYYSIAINYR KNELEEKMLL NLHKKKWTDG LILKKFDTHS KTNEETVQEM LSLAIKYNKA VQEEDELPPE KLAIANVGRQ DAKKHLEEHV SNLMSSNIVQ
301: TLGTMLDTVV F
001: MEVMGLMLGE FVDEYTVRVV DVFAMPQSGT GVSVEAVDHV FQTNMLDMLK QTGRPEMVVG WYHSHPGFGC WLSGVDINTQ QSFEALNQRA VAVVVDPIQS
101: VKGKVVIDAF RSINPQTIML GQEPRQTTSN LGHLNKPSIQ ALIHGLNRHY YSIAINYRKN ELEEKMLLNL HKKKWTDGLT LRRFDTHSKT NEQTVQEMLS
201: LAAKYNKAVQ EEDELSPEKL AIVNVGRQDA KKHLEEHVSN LMSSNIVQTL GTMLDTVVF
101: VKGKVVIDAF RSINPQTIML GQEPRQTTSN LGHLNKPSIQ ALIHGLNRHY YSIAINYRKN ELEEKMLLNL HKKKWTDGLT LRRFDTHSKT NEQTVQEMLS
201: LAAKYNKAVQ EEDELSPEKL AIVNVGRQDA KKHLEEHVSN LMSSNIVQTL GTMLDTVVF
Arabidopsis Description
RPN1126S proteasome non-ATPase regulatory subunit 14 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LT08]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.