Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU2Hr1G067660.1 | Barley | cytosol, peroxisome | 35.84 | 88.57 |
| HORVU1Hr1G017260.3 | Barley | cytosol | 45.09 | 69.03 |
| HORVU0Hr1G025410.1 | Barley | cytosol | 61.85 | 35.55 |
| HORVU4Hr1G048730.1 | Barley | cytosol | 61.85 | 35.43 |
| HORVU3Hr1G021300.1 | Barley | cytosol, plastid | 28.9 | 30.3 |
| HORVU3Hr1G054660.1 | Barley | cytosol | 28.32 | 20.08 |
| HORVU0Hr1G018470.1 | Barley | cytosol | 27.17 | 19.34 |
| HORVU6Hr1G023630.1 | Barley | cytosol | 26.01 | 18.75 |
| HORVU2Hr1G112000.1 | Barley | cytosol | 32.95 | 14.32 |
| HORVU1Hr1G058180.1 | Barley | plastid | 27.75 | 13.68 |
| HORVU3Hr1G037790.1 | Barley | nucleus, plastid | 27.17 | 12.98 |
| HORVU7Hr1G096410.6 | Barley | cytosol, plastid | 20.81 | 10.81 |
| HORVU1Hr1G008160.1 | Barley | cytosol | 5.2 | 5.92 |
| HORVU7Hr1G078010.1 | Barley | cytosol | 4.62 | 5.88 |
| HORVU4Hr1G047410.2 | Barley | cytosol, mitochondrion, peroxisome | 8.09 | 5.53 |
| HORVU2Hr1G056160.5 | Barley | cytosol | 5.2 | 5.36 |
| HORVU3Hr1G113750.1 | Barley | cytosol | 4.05 | 4.52 |
Protein Annotations
| EnsemblPlants:HORVU6Hr1G058050.2 | EnsemblPlantsGene:HORVU6Hr1G058050 | Gene3D:3.40.140.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:JAMM/MPN+_dom | PANTHER:PTHR10410 | PANTHER:PTHR10410:SF14 | PFAM:PF01398 | SEG:seg | UniParc:UPI000B47858E |
| UniProt:A0A287UAY3 | MapMan:35.1 | : | : | : | : |
Description
No Description!
Coordinates
chrchr6H:-:378756909..378759101
Molecular Weight (calculated)
19096.9 Da
IEP (calculated)
8.767
GRAVY (calculated)
-0.263
Length
173 amino acids
Sequence
(BLAST)
(BLAST)
001: MEPTSSSAVA RQTWELENNI PAAPSNPDAM DAIYRYDEAA NGRAHQEKPW ATDPHHFRRA RISALALLKM VVHGHAGGTI EIMGLMQGKF QGDSIIVMDA
101: FALPSRAPKP GSTPRPTPTS TWSSTPPSTS RLEGWKMWLA STTHILVMDV GCQALMFQLR CLISSFKNHS WLL
101: FALPSRAPKP GSTPRPTPTS TWSSTPPSTS RLEGWKMWLA STTHILVMDV GCQALMFQLR CLISSFKNHS WLL
1: MEGSSSTIAR KTWELENSIL TVDSPDSTSD NIFYYDDTSQ TRFQQEKPWE NDPHYFKRVK ISALALLKMV VHARSGGTIE IMGLMQG
Arabidopsis Description
CSN5BCOP9 signalosome complex subunit 5b [Source:UniProtKB/Swiss-Prot;Acc:Q9FVU9]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.