Factsheet for TraesCS7B01G316000.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G409200.1	Wheat	cytosol	96.44	96.44
TraesCS7A01G416000.1	Wheat	cytosol	92.56	92.56
Os06t0703600-01	Rice	cytosol	72.49	72.73
HORVU7Hr1G096410.6	Barley	cytosol, plastid	74.76	69.37
KRH21194	Soybean	cytosol, nucleus	65.05	65.05
VIT_18s0001g10820.t01	Wine grape	cytosol	64.72	64.72
CDY59032	Canola	cytosol	49.19	64.68
KRH11080	Soybean	cytosol	64.4	64.4
CDY16857	Canola	cytosol	64.08	64.29
CDX87167	Canola	cytosol	64.08	64.29
CDX88035	Canola	cytosol	64.08	64.29
CDX80372	Canola	extracellular	64.08	64.29
Bra009693.1-P	Field mustard	cytosol	64.08	64.29
Bra026492.1-P	Field mustard	cytosol	64.08	64.29
TraesCS3B01G213500.1	Wheat	cytosol	63.75	64.17
KRH05705	Soybean	cytosol, nucleus	64.72	64.1
CDY46961	Canola	cytosol	63.75	63.96
PGSC0003DMT400020708	Potato	cytosol	64.4	63.78
CDY40791	Canola	cytosol	63.43	63.64
Solyc04g079200.2.1	Tomato	nucleus	64.08	63.46
KRH15339	Soybean	nucleus	64.4	62.97
Bra029375.1-P	Field mustard	cytosol	50.16	62.25
AT5G27607.1	Thale cress	extracellular, plastid	15.53	39.34

Protein Annotations

MapMan:19.2.6.2.2.10	Gene3D:3.40.140.10	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0006464	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016787	GO:GO:0019538
GO:GO:0061578	InterPro:IPR037518	InterPro:JAMM/MPN+_dom	InterPro:MPN	PFAM:PF01398	PFscan:PS50249
InterPro:PSMD14	PANTHER:PTHR10410	PANTHER:PTHR10410:SF13	SMART:SM00232	SUPFAM:SSF102712	EnsemblPlantsGene:TraesCS7B01G316000
EnsemblPlants:TraesCS7B01G316000.1	TIGR:cd08069	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7B:+:565559193..565560205

Molecular Weight (calculated)

33637.6 Da

IEP (calculated)

5.183

GRAVY (calculated)

-0.075

Length

309 amino acids

Sequence
(BLAST)

001: MDDNMLAGLL AGAGLPVRPP GGDTPLPDSS EQIYIAPVAL LKMLKHARAG VPMEVMGLML GEFVDEYTVT VVDVFAMPQS GTGVSVEAVD HAFQTNMMDM
101: LRQTGRPEMV VGWYHSHPGF GCWLSGTDVQ TQLSFEQLNP RAVAVVIDPI QSVRGKVVMD AFRLINPTAM LTGHEPRQTT SNVGGTVRPS VEARVHGLGV
201: HYYSLAIGHR QNEVEERMLA CLNRKRWSDG LVLQRFEDAE NAGAVSGIRD LAVQYDAQVR EEDVTPPERL AVVRAGRLDA KKQLGERAEA AMSGNIVQAL
301: GMMLDTVTF

Best Arabidopsis Sequence Match ( AT1G22920.1 )
(BLAST)

001: MEGSSSAIAR KTWELENNIL PVEPTDSASD SIFHYDDASQ AKIQQEKPWA SDPNYFKRVH ISALALLKMV VHARSGGTIE IMGLMQGKTE GDTIIVMDAF
101: ALPVEGTETR VNAQSDAYEY MVEYSQTSKL AGRLENVVGW YHSHPGYGCW LSGIDVSTQM LNQQYQEPFL AVVIDPTRTV SAGKVEIGAF RTYPEGHKIS
201: DDHVSEYQTI PLNKIEDFGV HCKQYYSLDI TYFKSSLDSH LLDLLWNKYW VNTLSSSPLL GNGDYVAGQI SDLAEKLEQA ESQLANSRYG GIAPAGHQRR
301: KEDEPQLAKI TRDSAKITVE QVHGLMSQVI KDILFNSARQ SKKSADDSSD PEPMITS

Arabidopsis Description

CSN5ACOP9 signalosome complex subunit 5a [Source:UniProtKB/Swiss-Prot;Acc:Q8LAZ7]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.