Factsheet for Os06t0703600-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G416000.1	Wheat	cytosol	75.0	74.76
TraesCS7D01G409200.1	Wheat	cytosol	72.73	72.49
TraesCS7B01G316000.1	Wheat	cytosol	72.73	72.49
KRH21194	Soybean	cytosol, nucleus	66.23	66.02
Bra029375.1-P	Field mustard	cytosol	52.92	65.46
VIT_18s0001g10820.t01	Wine grape	cytosol	65.58	65.37
KRH11080	Soybean	cytosol	65.58	65.37
KRH05705	Soybean	cytosol, nucleus	65.91	65.06
Solyc04g079200.2.1	Tomato	nucleus	65.58	64.74
PGSC0003DMT400020708	Potato	cytosol	65.58	64.74
CDY59032	Canola	cytosol	49.35	64.68
CDY40791	Canola	cytosol	64.61	64.61
Bra009693.1-P	Field mustard	cytosol	64.61	64.61
Bra026492.1-P	Field mustard	cytosol	64.61	64.61
CDY16857	Canola	cytosol	64.61	64.61
CDX80372	Canola	extracellular	64.61	64.61
CDX88035	Canola	cytosol	64.61	64.61
CDX87167	Canola	cytosol	64.61	64.61
CDY46961	Canola	cytosol	64.29	64.29
KRH15339	Soybean	nucleus	65.58	63.92
Os05t0371200-01	Rice	cytosol	63.64	63.84
Os01t0267200-01	Rice	plasma membrane, plastid	63.31	63.52
HORVU7Hr1G096410.6	Barley	cytosol, plastid	63.96	59.16
AT5G27607.1	Thale cress	extracellular, plastid	15.26	38.52
Os04t0654700-02	Rice	cytosol	27.6	23.61

Protein Annotations

MapMan:19.2.6.2.2.10	Gene3D:3.40.140.10	EntrezGene:4341987	EMBL:AK110999	ProteinID:BAD54040.1	ProteinID:BAF20414.1
ProteinID:BAS99374.1	GO:GO:0000502	GO:GO:0003674	GO:GO:0003824	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0006464	GO:GO:0008150	GO:GO:0008152
GO:GO:0009987	GO:GO:0016787	GO:GO:0019538	GO:GO:0061578	GO:GO:0070536	InterPro:IPR037518
InterPro:JAMM/MPN+_dom	MEROPS:M67.001	InterPro:MPN	EnsemblPlantsGene:Os06g0703600	EnsemblPlants:Os06t0703600-01	PFAM:PF01398
PFscan:PS50249	PANTHER:PTHR10410	PANTHER:PTHR10410:SF5	UniProt:Q5Z816	SMART:SM00232	SUPFAM:SSF102712
UniParc:UPI0000446F0F	RefSeq:XP_015643463.1	:	:	:	:

Description

Similar to 26S proteasome non-ATPase regulatory subunit 14 (26S proteasome regulatory subunit rpn11). (Os06t0703600-01)

Coordinates

chr6:-:29711342..29712615

Molecular Weight (calculated)

33122.1 Da

IEP (calculated)

5.587

GRAVY (calculated)

-0.037

Length

308 amino acids

Sequence
(BLAST)

001: MDANMLSAMM AAVGGDKPQP DTSEQINVSP LALLKMLKHG RAGVPMEVMG LMLGEFVDEY TVTVADVFAM PQSGTGVSVE AVDHAFQSEM LEMLRQTGRP
101: EMVVGWYHSH PGFGCWLSGT DMATQQSFEQ LHPRAVAVVI DPVQSVKGKV VMDAFRLVDH MAMVLGGAAG GEARQTTSNV GAVARPSAVA LVHGLGRHYY
201: SLAISYRMKE GEERMLACLS RSGWSDGFAL RRFGAHDAGN EAAVRGMRDL AVGYGAQVRE EDETPPERLA VVRAGKVDAK GKLEEKAMDA MSANIVQTLG
301: MMLDTVTF

Best Arabidopsis Sequence Match ( AT5G23540.1 )
(BLAST)

001: MERLQRIFGA GGGLGHASPD SPTLDTSEQV YISSLALLKM LKHGRAGVPM EVMGLMLGEF VDEYTVRVVD VFAMPQSGTG VSVEAVDHVF QTNMLDMLKQ
101: TGRPEMVVGW YHSHPGFGCW LSGVDINTQQ SFEALNQRAV AVVVDPIQSV KGKVVIDAFR SINPQTIMLG QEPRQTTSNL GHLNKPSIQA LIHGLNRHYY
201: SIAINYRKNE LEEKMLLNLH KKKWTDGLTL RRFDTHSKTN EQTVQEMLSL AAKYNKAVQE EDELSPEKLA IVNVGRQDAK KHLEEHVSNL MSSNIVQTLG
301: TMLDTVVF

Arabidopsis Description

RPN1126S proteasome non-ATPase regulatory subunit 14 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LT08]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.