Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY59032 | Canola | cytosol | 76.3 | 100.0 |
| Bra009693.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| Bra026492.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX80372 | Canola | extracellular | 100.0 | 100.0 |
| CDX87167 | Canola | cytosol | 100.0 | 100.0 |
| CDX88035 | Canola | cytosol | 100.0 | 100.0 |
| CDY16857 | Canola | cytosol | 100.0 | 100.0 |
| CDY46961 | Canola | cytosol | 99.35 | 99.35 |
| CDY40791 | Canola | cytosol | 98.38 | 98.38 |
| Bra029375.1-P | Field mustard | cytosol | 78.9 | 97.59 |
| VIT_18s0001g10820.t01 | Wine grape | cytosol | 95.13 | 94.82 |
| KRH11080 | Soybean | cytosol | 94.16 | 93.85 |
| KRH21194 | Soybean | cytosol, nucleus | 94.16 | 93.85 |
| KRH05705 | Soybean | cytosol, nucleus | 94.81 | 93.59 |
| PGSC0003DMT400020708 | Potato | cytosol | 93.83 | 92.63 |
| Solyc04g079200.2.1 | Tomato | nucleus | 92.86 | 91.67 |
| KRH15339 | Soybean | nucleus | 93.83 | 91.46 |
| AT5G27607.1 | Thale cress | extracellular, plastid | 15.91 | 40.16 |
| AT1G22920.1 | Thale cress | cytosol | 28.57 | 24.65 |
| AT1G71230.1 | Thale cress | cytosol | 28.25 | 24.3 |
Protein Annotations
| MapMan:19.2.6.2.2.10 | Gene3D:3.40.140.10 | EntrezGene:832420 | UniProt:A0A178UJB9 | ProteinID:AED93181.1 | EMBL:AK228634 |
| ArrayExpress:AT5G23540 | EnsemblPlantsGene:AT5G23540 | RefSeq:AT5G23540 | TAIR:AT5G23540 | RefSeq:AT5G23540-TAIR-G | EnsemblPlants:AT5G23540.1 |
| TAIR:AT5G23540.1 | EMBL:AY070073 | EMBL:AY086277 | EMBL:AY091329 | EMBL:AY230843 | EMBL:AY230844 |
| EMBL:AY230845 | Unigene:At.22926 | ProteinID:BAA97246.1 | GO:GO:0000502 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005634 |
| GO:GO:0005737 | GO:GO:0005829 | GO:GO:0006464 | GO:GO:0006508 | GO:GO:0006950 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008233 | GO:GO:0008237 | GO:GO:0009056 | GO:GO:0009628 | GO:GO:0009651 |
| GO:GO:0009987 | GO:GO:0016787 | GO:GO:0019538 | GO:GO:0030163 | GO:GO:0046872 | GO:GO:0061578 |
| GO:GO:0070536 | InterPro:IPR037518 | InterPro:JAMM/MPN+_dom | MEROPS:M67.001 | InterPro:MPN | RefSeq:NP_197745.1 |
| ProteinID:OAO93630.1 | PFAM:PF01398 | PFAM:PF13012 | PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001170 |
| PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 |
| PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009001 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 |
| PO:PO:0025281 | PFscan:PS50249 | InterPro:PSMD14 | PANTHER:PTHR10410 | PANTHER:PTHR10410:SF13 | UniProt:Q9LT08 |
| InterPro:Rpn11/EIF3F_C | SMART:SM00232 | SUPFAM:SSF102712 | UniParc:UPI000009ECF6 | SEG:seg | : |
Description
RPN1126S proteasome non-ATPase regulatory subunit 14 homolog [Source:UniProtKB/Swiss-Prot;Acc:Q9LT08]
Coordinates
chr5:+:7937630..7939604
Molecular Weight (calculated)
34355.5 Da
IEP (calculated)
6.804
GRAVY (calculated)
-0.243
Length
308 amino acids
Sequence
(BLAST)
(BLAST)
001: MERLQRIFGA GGGLGHASPD SPTLDTSEQV YISSLALLKM LKHGRAGVPM EVMGLMLGEF VDEYTVRVVD VFAMPQSGTG VSVEAVDHVF QTNMLDMLKQ
101: TGRPEMVVGW YHSHPGFGCW LSGVDINTQQ SFEALNQRAV AVVVDPIQSV KGKVVIDAFR SINPQTIMLG QEPRQTTSNL GHLNKPSIQA LIHGLNRHYY
201: SIAINYRKNE LEEKMLLNLH KKKWTDGLTL RRFDTHSKTN EQTVQEMLSL AAKYNKAVQE EDELSPEKLA IVNVGRQDAK KHLEEHVSNL MSSNIVQTLG
301: TMLDTVVF
101: TGRPEMVVGW YHSHPGFGCW LSGVDINTQQ SFEALNQRAV AVVVDPIQSV KGKVVIDAFR SINPQTIMLG QEPRQTTSNL GHLNKPSIQA LIHGLNRHYY
201: SIAINYRKNE LEEKMLLNLH KKKWTDGLTL RRFDTHSKTN EQTVQEMLSL AAKYNKAVQE EDELSPEKLA IVNVGRQDAK KHLEEHVSNL MSSNIVQTLG
301: TMLDTVVF
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.