Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 1
- golgi 1
- extracellular 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004106.1-P | Field mustard | nucleus | 79.45 | 81.69 |
| CDY39298 | Canola | nucleus | 79.45 | 81.69 |
| CDY07438 | Canola | nucleus | 79.45 | 80.56 |
| KRH16129 | Soybean | cytosol | 73.97 | 73.97 |
| KRH63506 | Soybean | cytosol | 73.97 | 73.97 |
| KRH54417 | Soybean | cytosol | 72.6 | 72.6 |
| VIT_17s0000g08090.t01 | Wine grape | cytosol, mitochondrion, nucleus | 67.12 | 71.01 |
| Solyc03g114170.2.1 | Tomato | nucleus | 57.53 | 70.0 |
| VIT_14s0066g01530.t01 | Wine grape | nucleus | 69.86 | 69.86 |
| PGSC0003DMT400062932 | Potato | cytosol, mitochondrion, nucleus | 68.49 | 67.57 |
| PGSC0003DMT400069698 | Potato | nucleus | 67.12 | 66.22 |
| KRH04963 | Soybean | vacuole | 64.38 | 39.5 |
Protein Annotations
| MapMan:16.11.2.4 | EntrezGene:834532 | UniProt:A0A178USB4 | ProteinID:AED95188.1 | EMBL:AJ619976 | ArrayExpress:AT5G45010 |
| EnsemblPlantsGene:AT5G45010 | RefSeq:AT5G45010 | TAIR:AT5G45010 | RefSeq:AT5G45010-TAIR-G | EnsemblPlants:AT5G45010.1 | TAIR:AT5G45010.1 |
| Symbol:ATDSS1(V) | EMBL:AY063839 | EMBL:AY086259 | EMBL:AY091311 | ProteinID:BAB10884.1 | InterPro:DSS1_SEM1 |
| GO:GO:0000502 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0006406 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0008541 |
| GO:GO:0009987 | GO:GO:0016043 | GO:GO:0043248 | RefSeq:NP_199314.1 | ProteinID:OAO96370.1 | PFAM:PF05160 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 |
| PANTHER:PTHR16771 | PANTHER:PTHR16771:SF5 | UniProt:Q2PDG4 | UniProt:Q9FL96 | SMART:SM01385 | UniParc:UPI00000A4D8F |
| SEG:seg | : | : | : | : | : |
Description
DSS1(V)DSS1(V) [Source:UniProtKB/TrEMBL;Acc:Q2PDG4]
Coordinates
chr5:-:18166898..18168383
Molecular Weight (calculated)
8698.6 Da
IEP (calculated)
3.691
GRAVY (calculated)
-1.147
Length
73 amino acids
Sequence
(BLAST)
(BLAST)
1: MAAEPKAAVE VVKVDLFEDD DEFEEFEINE DWLEKEEVKE VSLQWEDDWD DDDVSDDFSR QLKKELENAS EKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.