Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 2
- cytosol 2
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra020637.1-P | Field mustard | mitochondrion | 67.59 | 69.5 |
| VIT_04s0023g02500.t01 | Wine grape | mitochondrion | 56.55 | 67.77 |
| KRH14129 | Soybean | mitochondrion | 49.66 | 64.29 |
| PGSC0003DMT400040057 | Potato | cytosol | 52.41 | 63.87 |
| Solyc02g062530.2.1 | Tomato | nucleus | 57.24 | 61.48 |
| TraesCS7B01G481300.1 | Wheat | mitochondrion | 51.03 | 60.66 |
| TraesCS7D01G553800.1 | Wheat | mitochondrion | 50.34 | 59.84 |
| TraesCS7A01G557000.1 | Wheat | mitochondrion | 50.34 | 59.84 |
| OQU80303 | Sorghum | mitochondrion | 53.1 | 58.33 |
| HORVU7Hr1G120820.4 | Barley | mitochondrion | 48.97 | 58.2 |
| Zm00001d020693_P001 | Maize | mitochondrion | 51.72 | 56.82 |
| Os08t0360000-01 | Rice | mitochondrion | 49.66 | 54.55 |
| HORVU2Hr1G027020.1 | Barley | mitochondrion | 33.79 | 47.12 |
| GSMUA_Achr9P18680_001 | Banana | mitochondrion | 27.59 | 46.51 |
| TraesCS6B01G100800.2 | Wheat | nucleus | 46.9 | 32.85 |
| HORVU4Hr1G041800.1 | Barley | nucleus | 18.62 | 28.42 |
| AT1G73940.1 | Thale cress | mitochondrion | 26.9 | 25.83 |
| HORVU5Hr1G079760.1 | Barley | mitochondrion | 39.31 | 20.43 |
Protein Annotations
| MapMan:35.2 | EntrezGene:835001 | ProteinID:AED95807.1 | ProteinID:AED95808.1 | EMBL:AK176066 | ArrayExpress:AT5G49410 |
| EnsemblPlantsGene:AT5G49410 | RefSeq:AT5G49410 | TAIR:AT5G49410 | RefSeq:AT5G49410-TAIR-G | EnsemblPlants:AT5G49410.1 | TAIR:AT5G49410.1 |
| Unigene:At.29785 | ProteinID:BAB09911.1 | EMBL:BT025506 | GO:GO:0008150 | RefSeq:NP_001032044.1 | RefSeq:NP_199752.1 |
| PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 |
| PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 |
| PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 |
| PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 |
| PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PANTHER:PTHR35110 |
| PANTHER:PTHR35110:SF1 | UniProt:Q9FGX6 | UniParc:UPI00000A4E61 | : | : | : |
Description
At5g49410 [Source:UniProtKB/TrEMBL;Acc:Q9FGX6]
Coordinates
chr5:+:20032287..20034020
Molecular Weight (calculated)
16922.0 Da
IEP (calculated)
11.224
GRAVY (calculated)
-0.681
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MLRNMMMPWN SSDHNVVGML TRHFATKPKP KMKPIELNTP PEQTQTITRV IFDILKDHGP LTIAETWDRV KEVGLRGLTS KRHMKIILRW MRERQKLKLI
101: CNHVGPHKQF LYTTWFTKHN PSSKFPKLPP ENLTGKSSGH PPKLP
101: CNHVGPHKQF LYTTWFTKHN PSSKFPKLPP ENLTGKSSGH PPKLP
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.