Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 2
- nucleus 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7B01G481300.1 | Wheat | mitochondrion | 52.17 | 88.52 |
| Os08t0360000-01 | Rice | mitochondrion | 49.28 | 77.27 |
| OQU80303 | Sorghum | mitochondrion | 48.31 | 75.76 |
| Zm00001d020693_P001 | Maize | mitochondrion | 43.96 | 68.94 |
| HORVU2Hr1G027020.1 | Barley | mitochondrion | 32.85 | 65.38 |
| VIT_04s0023g02500.t01 | Wine grape | mitochondrion | 34.78 | 59.5 |
| KRH14129 | Soybean | mitochondrion | 30.43 | 56.25 |
| PGSC0003DMT400040057 | Potato | cytosol | 29.47 | 51.26 |
| Solyc02g062530.2.1 | Tomato | nucleus | 32.85 | 50.37 |
| Bra020637.1-P | Field mustard | mitochondrion | 33.82 | 49.65 |
| GSMUA_Achr9P18680_001 | Banana | mitochondrion | 19.81 | 47.67 |
| AT5G49410.1 | Thale cress | cytosol | 32.85 | 46.9 |
| HORVU4Hr1G041800.1 | Barley | nucleus | 20.77 | 45.26 |
| HORVU5Hr1G079760.1 | Barley | mitochondrion | 37.2 | 27.6 |
| TraesCS5B01G538500.1 | Wheat | plastid | 15.94 | 20.5 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G100800.2 | EnsemblPlantsGene:TraesCS6B01G100800 | PANTHER:PTHR35110 | PANTHER:PTHR35110:SF1 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr6B:-:79152443..79153235
Molecular Weight (calculated)
23487.4 Da
IEP (calculated)
10.475
GRAVY (calculated)
-0.670
Length
207 amino acids
Sequence
(BLAST)
(BLAST)
001: MVGSSVVYTS CRPSSCTRPA SFLHHPADQA HLGDQPGLLP DGSGDGNSSH LKGCGERCVG AEMFATVARW AEKKGKPKMA PIELTTTAEQ AQSITRTIFD
101: VVKEHGPLTI SDVWEHVTDV GPRGLTSKRQ MKIMLRWMRE KQKLRLISDH DGPHKQFLYT TWFTNPKNAP QRPKRELNRE SLVAAWTRRR KRCMRWCCGR
201: PRMVEHV
101: VVKEHGPLTI SDVWEHVTDV GPRGLTSKRQ MKIMLRWMRE KQKLRLISDH DGPHKQFLYT TWFTNPKNAP QRPKRELNRE SLVAAWTRRR KRCMRWCCGR
201: PRMVEHV
001: MLRNMMMPWN SSDHNVVGML TRHFATKPKP KMKPIELNTP PEQTQTITRV IFDILKDHGP LTIAETWDRV KEVGLRGLTS KRHMKIILRW MRERQKLKLI
101: CNHVGPHKQF LYTTWFTKHN PSSKFPKLPP ENLTGKSSGH PPKLP
101: CNHVGPHKQF LYTTWFTKHN PSSKFPKLPP ENLTGKSSGH PPKLP
Arabidopsis Description
At5g49410 [Source:UniProtKB/TrEMBL;Acc:Q9FGX6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.