Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G325600.1 | Wheat | mitochondrion | 93.79 | 96.18 |
| HORVU5Hr1G123210.2 | Barley | cytosol | 85.71 | 89.61 |
| TraesCS5D01G556800.1 | Wheat | mitochondrion | 85.71 | 87.34 |
| Os03t0852500-01 | Rice | cytosol, mitochondrion, plastid | 68.94 | 70.25 |
| EER90499 | Sorghum | cytosol, mitochondrion, plastid | 67.7 | 68.12 |
| Zm00001d012833_P002 | Maize | mitochondrion | 59.01 | 56.55 |
| GSMUA_Achr11P... | Banana | mitochondrion | 47.83 | 50.33 |
| Bra003821.1-P | Field mustard | mitochondrion | 32.92 | 44.54 |
| VIT_02s0025g03090.t01 | Wine grape | mitochondrion | 37.89 | 43.26 |
| GSMUA_Achr5P20420_001 | Banana | plastid | 40.37 | 39.63 |
| Bra015953.1-P | Field mustard | mitochondrion | 39.13 | 39.62 |
| CDX96497 | Canola | mitochondrion | 38.51 | 39.24 |
| AT1G73940.1 | Thale cress | mitochondrion | 36.65 | 39.07 |
| CDY63166 | Canola | mitochondrion | 38.51 | 38.99 |
| CDX73027 | Canola | mitochondrion | 37.89 | 38.85 |
| TraesCS7B01G481300.1 | Wheat | mitochondrion | 18.63 | 24.59 |
| TraesCS6B01G100800.2 | Wheat | nucleus | 20.5 | 15.94 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G538500.1 | EnsemblPlantsGene:TraesCS5B01G538500 | PANTHER:PTHR35110 | PANTHER:PTHR35110:SF2 | SEG:seg | MapMan:35.2 |
Description
No Description!
Coordinates
chr5B:+:693995295..693996691
Molecular Weight (calculated)
17566.2 Da
IEP (calculated)
10.900
GRAVY (calculated)
-0.595
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MQFLRGVGGG GAGGAGGAGS MAWEVLRRHF SRKRAVDIRR INPKVPKEEA VAISGRLLQI LADHGPLTVG NTWNHAKDAA IDGLNSKTHM KILLKWMWGR
101: RIIKLSCTQA GNTKKFLYSP FTADDAEAAE EPSPAEEQPK KKGWKGKHPK YQTKKQPAAA A
101: RIIKLSCTQA GNTKKFLYSP FTADDAEAAE EPSPAEEQPK KKGWKGKHPK YQTKKQPAAA A
001: MWFAGGGGGL RKLCRASAIF DNEISYNSLL VRYMSRERAV NVRKINPKVP IQEAYAISNS LYDLFKLHGP LSVPNTWLRA QEAGVSGLNS KTHMKLLLKW
101: MRGKKMLKLI CNQVGSSKKF FHTVLPEDPL QEQPAAPIEN KKQAVKKKRS K
101: MRGKKMLKLI CNQVGSSKKF FHTVLPEDPL QEQPAAPIEN KKQAVKKKRS K
Arabidopsis Description
At1g73940/F2P9_19 [Source:UniProtKB/TrEMBL;Acc:Q9C9B5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.