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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 1
  • mitochondrion 6
  • nucleus 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra015953.1-P Field mustard mitochondrion 91.72 90.57
CDX96497 Canola mitochondrion 91.08 90.51
CDY63166 Canola mitochondrion 84.71 83.65
AT1G73940.1 Thale cress mitochondrion 63.69 66.23
VIT_02s0025g03090.t01 Wine grape mitochondrion 50.96 56.74
GSMUA_Achr11P... Banana mitochondrion 42.68 43.79
Os03t0852500-01 Rice cytosol, mitochondrion, plastid 42.04 41.77
EER90499 Sorghum cytosol, mitochondrion, plastid 39.49 38.75
HORVU5Hr1G123210.2 Barley cytosol 37.58 38.31
TraesCS5D01G556800.1 Wheat mitochondrion 38.22 37.97
TraesCS5B01G538500.1 Wheat plastid 38.85 37.89
TraesCS4A01G325600.1 Wheat mitochondrion 36.94 36.94
Zm00001d012833_P002 Maize mitochondrion 36.94 34.52
GSMUA_Achr5P20420_001 Banana plastid 35.67 34.15
Protein Annotations
EnsemblPlants:CDX73027EnsemblPlantsGene:GSBRNA2T00103469001PANTHER:PTHR35110PANTHER:PTHR35110:SF2ProteinID:CDX73027ProteinID:CDX73027.1
SEG:segUniParc:UPI0001CABBC6MapMan:35.2:::
Description
BnaC06g34750D
Coordinates
chrLK031797:-:1729752..1730682
Molecular Weight (calculated)
17636.6 Da
IEP (calculated)
11.009
GRAVY (calculated)
-0.476
Length
157 amino acids
Sequence
(BLAST)
001: MWFTGGGGGG LRKLCRASAT VFENEMSCNS LLVRYMSRER AVNVRKINPK VSIQEAHIIS SSLYEVFKKH GPLSVPNTWL RAQEAGVSGL NSKTHMKLML
101: KWMRGRKMLK LICNQVGSSK KFFHTVLPDD DIQQETPLAA TPAATENKKQ TSKRRSK
Best Arabidopsis Sequence Match ( AT1G73940.1 )
(BLAST)
001: MWFAGGGGGL RKLCRASAIF DNEISYNSLL VRYMSRERAV NVRKINPKVP IQEAYAISNS LYDLFKLHGP LSVPNTWLRA QEAGVSGLNS KTHMKLLLKW
101: MRGKKMLKLI CNQVGSSKKF FHTVLPEDPL QEQPAAPIEN KKQAVKKKRS K
Arabidopsis Description
At1g73940/F2P9_19 [Source:UniProtKB/TrEMBL;Acc:Q9C9B5]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.