Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 1
- plastid 2
- mitochondrion 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0852500-01 | Rice | cytosol, mitochondrion, plastid | 71.25 | 72.15 |
| HORVU5Hr1G123210.2 | Barley | cytosol | 67.5 | 70.13 |
| TraesCS4A01G325600.1 | Wheat | mitochondrion | 66.88 | 68.15 |
| TraesCS5B01G538500.1 | Wheat | plastid | 68.12 | 67.7 |
| TraesCS5D01G556800.1 | Wheat | mitochondrion | 66.25 | 67.09 |
| Zm00001d012833_P002 | Maize | mitochondrion | 65.62 | 62.5 |
| GSMUA_Achr11P... | Banana | mitochondrion | 50.0 | 52.29 |
| VIT_02s0025g03090.t01 | Wine grape | mitochondrion | 41.25 | 46.81 |
| Bra003821.1-P | Field mustard | mitochondrion | 33.75 | 45.38 |
| AT1G73940.1 | Thale cress | mitochondrion | 38.75 | 41.06 |
| CDX96497 | Canola | mitochondrion | 39.38 | 39.87 |
| CDX73027 | Canola | mitochondrion | 38.75 | 39.49 |
| GSMUA_Achr5P20420_001 | Banana | plastid | 40.0 | 39.02 |
| Bra015953.1-P | Field mustard | mitochondrion | 38.75 | 38.99 |
| CDY63166 | Canola | mitochondrion | 38.75 | 38.99 |
| OQU80303 | Sorghum | mitochondrion | 21.25 | 25.76 |
Protein Annotations
| EnsemblPlants:EER90499 | EnsemblPlantsGene:SORBI_3001G008800 | EntrezGene:8061398 | PANTHER:PTHR35110 | PANTHER:PTHR35110:SF2 | ProteinID:EER90499 |
| ProteinID:EER90499.1 | RefSeq:XP_002463501.1 | SEG:seg | UniParc:UPI0001A824D2 | UniProt:C5WS14 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr1:+:824643..826523
Molecular Weight (calculated)
16940.5 Da
IEP (calculated)
11.578
GRAVY (calculated)
-0.321
Length
160 amino acids
Sequence
(BLAST)
(BLAST)
001: MQFLRGGGGG GGGGFGGTAW EVLRRHFSRK RAVNVKRINP KVPKEEAVAI SERLVQILSD HGPLTVGNAW NHAKDAGIAG LNSKTHMKIL LKWMTGRNIV
101: KLSCVHVGNA KKFLYSPFTE SSAEALSAAA ADASNKASTQ GGRGKAVRGQ PKKRAAAVLQ
101: KLSCVHVGNA KKFLYSPFTE SSAEALSAAA ADASNKASTQ GGRGKAVRGQ PKKRAAAVLQ
001: MWFAGGGGGL RKLCRASAIF DNEISYNSLL VRYMSRERAV NVRKINPKVP IQEAYAISNS LYDLFKLHGP LSVPNTWLRA QEAGVSGLNS KTHMKLLLKW
101: MRGKKMLKLI CNQVGSSKKF FHTVLPEDPL QEQPAAPIEN KKQAVKKKRS K
101: MRGKKMLKLI CNQVGSSKKF FHTVLPEDPL QEQPAAPIEN KKQAVKKKRS K
Arabidopsis Description
At1g73940/F2P9_19 [Source:UniProtKB/TrEMBL;Acc:Q9C9B5]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.