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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7B01G481300.1 Wheat mitochondrion 81.82 88.52
TraesCS7D01G553800.1 Wheat mitochondrion 81.06 87.7
TraesCS7A01G557000.1 Wheat mitochondrion 81.06 87.7
HORVU7Hr1G120820.4 Barley mitochondrion 79.55 86.07
Zm00001d020693_P001 Maize mitochondrion 81.82 81.82
Os08t0360000-01 Rice mitochondrion 79.55 79.55
VIT_04s0023g02500.t01 Wine grape mitochondrion 61.36 66.94
HORVU2Hr1G027020.1 Barley mitochondrion 50.0 63.46
KRH14129 Soybean mitochondrion 51.52 60.71
Solyc02g062530.2.1 Tomato nucleus 59.85 58.52
PGSC0003DMT400040057 Potato cytosol 51.52 57.14
GSMUA_Achr9P18680_001 Banana mitochondrion 36.36 55.81
Bra020637.1-P Field mustard mitochondrion 58.33 54.61
AT5G49410.1 Thale cress cytosol 58.33 53.1
TraesCS6B01G100800.2 Wheat nucleus 75.76 48.31
HORVU4Hr1G041800.1 Barley nucleus 29.55 41.05
HORVU5Hr1G079760.1 Barley mitochondrion 55.3 26.16
EER90499 Sorghum cytosol, mitochondrion, plastid 25.76 21.25
Protein Annotations
EnsemblPlants:OQU80303EnsemblPlantsGene:SORBI_3007G107800EntrezGene:8069884PANTHER:PTHR35110PANTHER:PTHR35110:SF1ProteinID:EES14888.1
ProteinID:OQU80299.1ProteinID:OQU80300.1ProteinID:OQU80301.1ProteinID:OQU80302.1ProteinID:OQU80303ProteinID:OQU80303.1
RefSeq:XP_002445393.1UniParc:UPI0001A8792DUniProt:C5YKA2MapMan:35.2::
Description
hypothetical protein
Coordinates
chr7:-:38927647..38930060
Molecular Weight (calculated)
15242.6 Da
IEP (calculated)
11.143
GRAVY (calculated)
-0.743
Length
132 amino acids
Sequence
(BLAST)
001: MFATAARWAA KKGKPKMAPI ELTTPPEQAQ SITRAIFDVV REHGPLTISD VWDHVKDVGL RGLTSKRQMK IMLRWMRERQ KLRLICDHDG PHKQFLYTTW
101: FTNPRNAPQR PKPELKAKAE KLPTFPSSSK QP
Best Arabidopsis Sequence Match ( AT5G49410.1 )
(BLAST)
001: MLRNMMMPWN SSDHNVVGML TRHFATKPKP KMKPIELNTP PEQTQTITRV IFDILKDHGP LTIAETWDRV KEVGLRGLTS KRHMKIILRW MRERQKLKLI
101: CNHVGPHKQF LYTTWFTKHN PSSKFPKLPP ENLTGKSSGH PPKLP
Arabidopsis Description
At5g49410 [Source:UniProtKB/TrEMBL;Acc:Q9FGX6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.