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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 5
  • plasma membrane 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion
Any Predictor:cytosol, mitochondrion, plasma membrane, plastid
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plasma membrane, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:mitochondrion
YLoc:cytosol
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
VIT_04s0023g02500.t01 Wine grape mitochondrion 60.28 70.25
KRH14129 Soybean mitochondrion 53.9 67.86
AT5G49410.1 Thale cress cytosol 69.5 67.59
PGSC0003DMT400040057 Potato cytosol 53.9 63.87
TraesCS7D01G553800.1 Wheat mitochondrion 53.9 62.3
TraesCS7B01G481300.1 Wheat mitochondrion 53.9 62.3
TraesCS7A01G557000.1 Wheat mitochondrion 53.9 62.3
Solyc02g062530.2.1 Tomato nucleus 59.57 62.22
HORVU7Hr1G120820.4 Barley mitochondrion 52.48 60.66
OQU80303 Sorghum mitochondrion 54.61 58.33
Zm00001d020693_P001 Maize mitochondrion 53.19 56.82
Os08t0360000-01 Rice mitochondrion 53.19 56.82
GSMUA_Achr9P18680_001 Banana mitochondrion 31.21 51.16
HORVU2Hr1G027020.1 Barley mitochondrion 35.46 48.08
TraesCS6B01G100800.2 Wheat nucleus 49.65 33.82
HORVU4Hr1G041800.1 Barley nucleus 19.86 29.47
Bra003821.1-P Field mustard mitochondrion 24.82 29.41
Bra015953.1-P Field mustard mitochondrion 27.66 24.53
HORVU5Hr1G079760.1 Barley mitochondrion 41.13 20.79
Protein Annotations
EnsemblPlants:Bra020637.1EnsemblPlants:Bra020637.1-PEnsemblPlantsGene:Bra020637PANTHER:PTHR35110PANTHER:PTHR35110:SF1UniParc:UPI00025466F7
UniProt:M4DVU3MapMan:35.2::::
Description
AT5G49410 (E=2e-070) | unknown protein
Coordinates
chrA02:-:24038796..24039361
Molecular Weight (calculated)
16420.3 Da
IEP (calculated)
11.347
GRAVY (calculated)
-0.604
Length
141 amino acids
Sequence
(BLAST)
001: MLRNVVPWNI SNQNVVGLLI RQFATKPKPK MKPIELNTPP EQTQTITRVI FDVLKEHGPL TIAETWDRVK EVGLRGLTSK RHMKIILRWM RERQKLKLIC
101: NHVGPHKQFL YTTWFTKHNP SKFSKPPENL TGKSSGHPKL P
Best Arabidopsis Sequence Match ( AT5G49410.1 )
(BLAST)
001: MLRNMMMPWN SSDHNVVGML TRHFATKPKP KMKPIELNTP PEQTQTITRV IFDILKDHGP LTIAETWDRV KEVGLRGLTS KRHMKIILRW MRERQKLKLI
101: CNHVGPHKQF LYTTWFTKHN PSSKFPKLPP ENLTGKSSGH PPKLP
Arabidopsis Description
At5g49410 [Source:UniProtKB/TrEMBL;Acc:Q9FGX6]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.