Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G120820.4 | Barley | mitochondrion | 26.52 | 60.66 |
| OQU80303 | Sorghum | mitochondrion | 26.16 | 55.3 |
| Os08t0360000-01 | Rice | mitochondrion | 25.81 | 54.55 |
| Zm00001d020693_P001 | Maize | mitochondrion | 24.01 | 50.76 |
| HORVU2Hr1G027020.1 | Barley | mitochondrion | 17.56 | 47.12 |
| PGSC0003DMT400040057 | Potato | cytosol | 19.71 | 46.22 |
| VIT_04s0023g02500.t01 | Wine grape | mitochondrion | 19.71 | 45.45 |
| Solyc02g062530.2.1 | Tomato | nucleus | 20.43 | 42.22 |
| KRH14129 | Soybean | mitochondrion | 16.85 | 41.96 |
| Bra020637.1-P | Field mustard | mitochondrion | 20.79 | 41.13 |
| GSMUA_Achr9P18680_001 | Banana | mitochondrion | 12.19 | 39.53 |
| AT5G49410.1 | Thale cress | cytosol | 20.43 | 39.31 |
| TraesCS6B01G100800.2 | Wheat | nucleus | 27.6 | 37.2 |
| HORVU4Hr1G041800.1 | Barley | nucleus | 8.96 | 26.32 |
| HORVU5Hr1G123210.2 | Barley | cytosol | 10.04 | 18.18 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G079760.1 | EnsemblPlantsGene:HORVU5Hr1G079760 | PANTHER:PTHR35110 | PANTHER:PTHR35110:SF1 | SEG:seg | UniParc:UPI000B481FC5 |
| UniProt:A0A287RYL0 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:557916748..557918845
Molecular Weight (calculated)
32242.7 Da
IEP (calculated)
12.369
GRAVY (calculated)
-0.553
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MSGRVARSQP RTWSKLRFSM TTTTTVLTGE WISRFLRRRF SRGPWWPPPS RQCAETIRAS RRRATRRRRF PAAAMAPERL TTAPEQAQSI TRTIFDVVKE
101: HGPLTISDVW DHIKVPFLLK LLQDSSLRAR TEPVRRNVFV STWLDGQCPL CPCNGLKCHF GFLVSQNLRC VKFPSGHRAE GLTSKRQMKI MLRWMREKQK
201: LRLICDHDVQ VPARRGARPP HHRLLVLPRR VPRRGEPPSA PKMQPCVPSA MHRHLAQVAL QLPTLPLQHH LRRRRGGAA
101: HGPLTISDVW DHIKVPFLLK LLQDSSLRAR TEPVRRNVFV STWLDGQCPL CPCNGLKCHF GFLVSQNLRC VKFPSGHRAE GLTSKRQMKI MLRWMREKQK
201: LRLICDHDVQ VPARRGARPP HHRLLVLPRR VPRRGEPPSA PKMQPCVPSA MHRHLAQVAL QLPTLPLQHH LRRRRGGAA
001: MLRNMMMPWN SSDHNVVGML TRHFATKPKP KMKPIELNTP PEQTQTITRV IFDILKDHGP LTIAETWDRV KEVGLRGLTS KRHMKIILRW MRERQKLKLI
101: CNHVGPHKQF LYTTWFTKHN PSSKFPKLPP ENLTGKSSGH PPKLP
101: CNHVGPHKQF LYTTWFTKHN PSSKFPKLPP ENLTGKSSGH PPKLP
Arabidopsis Description
At5g49410 [Source:UniProtKB/TrEMBL;Acc:Q9FGX6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.