Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 4
- cytosol 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
| nucleus:
25464976
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400040057 | Potato | cytosol | 83.7 | 94.96 |
| VIT_04s0023g02500.t01 | Wine grape | mitochondrion | 63.7 | 71.07 |
| KRH14129 | Soybean | mitochondrion | 55.56 | 66.96 |
| TraesCS7D01G553800.1 | Wheat | mitochondrion | 57.04 | 63.11 |
| TraesCS7B01G481300.1 | Wheat | mitochondrion | 57.04 | 63.11 |
| TraesCS7A01G557000.1 | Wheat | mitochondrion | 57.04 | 63.11 |
| HORVU7Hr1G120820.4 | Barley | mitochondrion | 55.56 | 61.48 |
| OQU80303 | Sorghum | mitochondrion | 58.52 | 59.85 |
| Bra020637.1-P | Field mustard | mitochondrion | 62.22 | 59.57 |
| Os08t0360000-01 | Rice | mitochondrion | 57.04 | 58.33 |
| Zm00001d020693_P001 | Maize | mitochondrion | 57.04 | 58.33 |
| AT5G49410.1 | Thale cress | cytosol | 61.48 | 57.24 |
| GSMUA_Achr9P18680_001 | Banana | mitochondrion | 32.59 | 51.16 |
| HORVU2Hr1G027020.1 | Barley | mitochondrion | 35.56 | 46.15 |
| TraesCS6B01G100800.2 | Wheat | nucleus | 50.37 | 32.85 |
| HORVU4Hr1G041800.1 | Barley | nucleus | 20.0 | 28.42 |
| HORVU5Hr1G079760.1 | Barley | mitochondrion | 42.22 | 20.43 |
Protein Annotations
| EnsemblPlants:Solyc02g062530.2.1 | EnsemblPlantsGene:Solyc02g062530.2 | PANTHER:PTHR35110 | PANTHER:PTHR35110:SF1 | SEG:seg | UniParc:UPI0002768279 |
| UniProt:K4B6E1 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chr2:-:34220495..34222847
Molecular Weight (calculated)
15480.1 Da
IEP (calculated)
11.507
GRAVY (calculated)
-0.648
Length
135 amino acids
Sequence
(BLAST)
(BLAST)
001: MFATAIRLVG RKPKPKMKPI KLKTPPEQTQ TITRTIFDIV KEHGPLNIAE TWDRVKDVGL RGLTSKGHMK IVLRWMRERQ KLKLICNHVG PQKKFLYTTW
101: FTNPNTMHTK PGSDISSPNT KQIFSGSNIT RPKSS
101: FTNPNTMHTK PGSDISSPNT KQIFSGSNIT RPKSS
001: MLRNMMMPWN SSDHNVVGML TRHFATKPKP KMKPIELNTP PEQTQTITRV IFDILKDHGP LTIAETWDRV KEVGLRGLTS KRHMKIILRW MRERQKLKLI
101: CNHVGPHKQF LYTTWFTKHN PSSKFPKLPP ENLTGKSSGH PPKLP
101: CNHVGPHKQF LYTTWFTKHN PSSKFPKLPP ENLTGKSSGH PPKLP
Arabidopsis Description
At5g49410 [Source:UniProtKB/TrEMBL;Acc:Q9FGX6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.