CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

nucleus 2
mitochondrion 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra003821.1-P	Field mustard	mitochondrion	69.81	93.28
CDX73027	Canola	mitochondrion	83.65	84.71
CDX96497	Canola	mitochondrion	81.13	81.65
AT1G73940.1	Thale cress	mitochondrion	63.52	66.89
VIT_02s0025g03090.t01	Wine grape	mitochondrion	49.06	55.32
GSMUA_Achr11P...	Banana	mitochondrion	42.77	44.44
Os03t0852500-01	Rice	cytosol, mitochondrion, plastid	40.25	40.51
EER90499	Sorghum	cytosol, mitochondrion, plastid	38.99	38.75
TraesCS5B01G538500.1	Wheat	plastid	38.99	38.51
HORVU5Hr1G123210.2	Barley	cytosol	36.48	37.66
TraesCS4A01G325600.1	Wheat	mitochondrion	36.48	36.94
TraesCS5D01G556800.1	Wheat	mitochondrion	36.48	36.71
Zm00001d012833_P002	Maize	mitochondrion	36.48	34.52
GSMUA_Achr5P20420_001	Banana	plastid	33.96	32.93

Protein Annotations

EnsemblPlants:CDY63166	EnsemblPlantsGene:GSBRNA2T00037983001	PANTHER:PTHR35110	PANTHER:PTHR35110:SF2	ProteinID:CDY63166	ProteinID:CDY63166.1
SEG:seg	UniParc:UPI0004EB9422	UniProt:A0A078JEH8	MapMan:35.2	:	:

Description

BnaCnng41560DBnaCnng41560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JEH8]

Coordinates

chrLK034254:-:10131..10752

Molecular Weight (calculated)

17781.8 Da

IEP (calculated)

11.153

GRAVY (calculated)

-0.481

Length

159 amino acids

Sequence
(BLAST)

001: MWFTGGGGGG GLRELCRASA AVLENKMSYN SLLVRYMSRE RAVNVRKINP KVSIQKAHII STSLYDVFKK HGPLSVPNTW LRAQEAGVSE INSKTHMKLL
101: LKWMRGRKML KLICNQVGSS KKFFHTILPE DRQQETPPPA AAAAAPTENK KQTFKGRSK

Best Arabidopsis Sequence Match ( AT1G73940.1 )
(BLAST)

001: MWFAGGGGGL RKLCRASAIF DNEISYNSLL VRYMSRERAV NVRKINPKVP IQEAYAISNS LYDLFKLHGP LSVPNTWLRA QEAGVSGLNS KTHMKLLLKW
101: MRGKKMLKLI CNQVGSSKKF FHTVLPEDPL QEQPAAPIEN KKQAVKKKRS K

Arabidopsis Description

At1g73940/F2P9_19 [Source:UniProtKB/TrEMBL;Acc:Q9C9B5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.